A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{GT1}Syx4BG01517 Insertion

General Information
Symbol Dmel\P{GT1}Syx4BG01517 Species D. melanogaster
Name FlyBase ID FBti0018418
Feature type transposable_element_insertion_site
Description
Inserted element P{GT1} Expression data
Affected gene(s) Syx4 Viability / fertility viable, fertile
Causes allele(s) Syx4BG01517 Stock availability 1 publicly available
LINE ID BG01517
Genomic Location
Chromosomal location X ( 3B4 ) Sequence location X:2,633,862..2,633,862 [+]
Map ( GBrowse ) detailed view FBti0042721 FBti0049898 FBti0071656 FBti0039231 FBti0104327 FBti0072016 FBti0066742 FBti0036747 FBti0018418 FBti0043627 FBti0045945 FBti0050541 FBti0048495 FBti0066803 FBti0067541 FBti0067736 FBti0046526 FBti0071283 FBti0055183 FBti0024057 FBti0069611 FBti0038331 FBti0049169 FBti0050575
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
X:2,633,862..2,633,862 [+]
Orientation
Cytological location
(computed by FlyBase)
3B4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
3C1 (reported as inferred from sequence location)
Comments concerning
location
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Flanking sequence
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Construct P{GT1}
Location-dependent
role
Size 8.447, 8.447Kb
Associated alleles
Molecular map
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Insertion may
affect gene
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Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
Origin as a multiple insertion line
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Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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Location X:2595985-2595986 confirmed by FlyBase alignment of dbGSS accession AZ933409 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
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Reported As
Symbol Synonym
P{GT1}BG01517
P{GT1}Syx4BG01517
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Lukacsovich and Asztalos, 1999.7.15, Dual tagging gene-trap of novel genes in Drosophila melanogaster.
Dual tagging gene-trap of novel genes in Drosophila melanogaster. [FBrf0108534]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]