A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{GT1}BG01539 Insertion

General Information
Symbol Dmel\P{GT1}BG01539 Species D. melanogaster
Name FlyBase ID FBti0018419
Feature type transposable_element_insertion_site
Description
Inserted element P{GT1} Expression data
Affected gene(s) Rh5 Viability / fertility viable, fertile
Causes allele(s) Stock availability 1 publicly available
LINE ID BG01539
Genomic Location
Chromosomal location 2L ( 33B7 ) Sequence location 2L:12,007,246..12,007,246 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0124749 FBti0128137 FBti0107801 FBti0114865 FBti0007770 FBti0072206 FBti0105046 FBti0051316 FBti0044671 FBti0033472 FBti0124750 FBti0113027 FBti0109801 FBti0110340 FBti0111728 FBti0057951 FBti0107875 FBti0049252 FBti0104129 FBti0104130 FBti0058041 FBti0018419 FBti0030182 FBti0010714 FBti0059633 FBti0024717 FBti0021101 FBti0051731
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{GT1}; created and vetted by the Gene Disruption Project (GDP). The P{GT1} construct is described as a dual-tagged gene trap (FBrf0132344):it carries (1) w[+mGT1] mini-white marker, designed to confer a pigmented eye phenotype only if the construct is inserted within a host gene, and (2) a promoter-less Ser\GAL4 gene which is expressed if it is produced as a fusion with the mRNA produced by the host gene. The construct also carries a Tn\neoR selectable marker (FBrf0132344).
(Bellen et al., 2004)
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:12,007,246..12,007,246 [+]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
33B7 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
33B9 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AZ933410
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
AZ933411
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{GT1}
Location-dependent
role
GAL4 gene trap
(Lukacsovich and Asztalos, 1999.7.15)
Size 8.447, 8.447Kb
Associated alleles
Scer\GAL4GT1
Tn\neoRHsp70Bb.PS
w+mGT
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Rh5
(Gene Disruption Project members, 2001-)
hide Alleles and Phenotypes
Causes alleles
Lethality
References
viable
(Gene Disruption Project members, 2001-)
Sterility
References
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
BG01539
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
12544
w1118; P{GT1}BG01539
hide Linkouts
hide Comments
Location 2L:12007246-12007247 confirmed by FlyBase alignment of dbGSS accessions AZ933411 and AZ933410 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
BG01539
(Gene Disruption Project members, 2001-, FlyBase, 1992-, Yamaguchi et al., 2008)
P{GT1}BG01539
(FlyBase, 2005, FlyBase, 1992-, )
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Yamaguchi et al., 2008, Proc. Natl. Acad. Sci. U.S.A. 105(12): 4910--4915
Motion vision is independent of color in Drosophila. [FBrf0204275]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
Lukacsovich and Asztalos, 1999.7.15, Dual tagging gene-trap of novel genes in Drosophila melanogaster.
Dual tagging gene-trap of novel genes in Drosophila melanogaster. [FBrf0108534]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]