A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{GT1}orb2BG02373 Insertion

General Information
Symbol Dmel\P{GT1}orb2BG02373 Species D. melanogaster
Name FlyBase ID FBti0018559
Feature type transposable_element_insertion_site
Description
Inserted element P{GT1} Expression data
Affected gene(s) orb2 Viability / fertility viable, fertile
Causes allele(s) orb2BG02373 Stock availability 1 publicly available
LINE ID BG02373
Genomic Location
Chromosomal location 3L ( 66E5 ) Sequence location 3L:8,946,356..8,946,356 [-]
Map ( GBrowse ) detailed view FBti0143500 FBti0143487 FBti0045695 FBti0110636 FBti0047391 FBti0104561 FBti0109260 FBti0109889 FBti0111636 FBti0108338 FBti0018559 FBti0059254 FBti0108983 FBti0113314 FBti0100186 FBti0109043 FBti0109592 FBti0111297 FBti0104666 FBti0109599 FBti0054626 FBti0050046 FBti0065127 FBti0047297 FBti0112077 FBti0058181 FBti0046808 FBti0112979 FBti0005603 FBti0074720
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Description
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3L:8,946,356..8,946,356 [-]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
66E5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
66E4 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
BH146143
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{GT1}
Location-dependent
role
GAL4 gene trap
(Lukacsovich and Asztalos, 1999.7.15)
Size 8.447, 8.447Kb
Associated alleles
Scer\GAL4GT1
Tn\neoRHsp70Bb.PS
w+mGT
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
orb2
(Gene Disruption Project members, 2001-)
hide Alleles and Phenotypes
Causes alleles
orb2BG02373
(Gene Disruption Project members, 2001-)
Lethality
References
viable
(Gene Disruption Project members, 2001-)
Sterility
References
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
The rough eye phenotype observed in Fmr1[sev.PW] flies is suppressed in a orb2[BG02373]/+ background.
(Cziko et al., 2009)
Dominantly enhances the Df(1)N-54l9/+ and N[55e11]/+ wing nicking phenotypes.
(Kankel et al., 2007)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
BG02373
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
12812
w1118; P{GT1}orb2BG02373
hide Linkouts
hide Comments
Location 3L:8927203-8927204 confirmed by FlyBase alignment of dbGSS accession BH146143 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
BG02373
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
P{GT1}CG5735BG02373
(FlyBase, 1992-)
P{GT1}orb2BG02373
(FlyBase, 2005, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Cziko et al., 2009, Genetics 182(4): 1051--1060
Genetic Modifiers of dFMR1 Encode RNA Granule Components in Drosophila. [FBrf0208636]
Kankel et al., 2007, Genetics 177(4): 2493--2505
Investigating the genetic circuitry of mastermind in Drosophila, a notch signal effector. [FBrf0202064]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Lukacsovich and Asztalos, 1999.7.15, Dual tagging gene-trap of novel genes in Drosophila melanogaster.
Dual tagging gene-trap of novel genes in Drosophila melanogaster. [FBrf0108534]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]