Dmel\roo{}793 Insertion

General Information
Symbol	Dmel\roo{}793	Species	D. melanogaster
Name		FlyBase ID	FBti0019985
Feature type	transposable_element
Description
Inserted element	roo	Expression data
Affected gene(s)		Viability / fertility
Causes allele(s)		Stock availability	none publicly available
LINE ID
Genomic Location
Chromosomal location	2R ( 46C1 )	Sequence location	2R:5,758,595..5,759,028 [+]
Map ( GBrowse )
Member of Large Scale Dataset(s)
Dataset
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
Chromosome (arm)
Sequence Location	2R:5,758,595..5,759,028 [+]
Orientation
Cytological location (computed by FlyBase)	46C1 ( inferred by FlyBase from sequence location )
Cytological location (reported)	46C1-46C1 (reported as inferred from sequence location) (Quesneville et al., 2005.6.22) 46C1-46C1 (reported as inferred from sequence location) (Kaminker et al., 2002)
Comments concerning location
Sequence Data
Flanking sequence
Inserted Element
Construct	roo
Location-dependent role
Size
Associated alleles
Molecular map
Affected Gene(s)
Insertion may affect gene
Alleles and Phenotypes
Causes alleles

Lethality References
Sterility References
Phenotype Manifest In

Detailed Description
Statement Reference
Expression Data
Reporter Expression

Additional Information
Statement Reference

Marker for
Reflects expression of
Reporter construct used in assay
External Images
FlyView (LinkOut)
Data on Genetic Line
Line ID
Origin as a multiple insertion line
Progenitor(s) within the Genome

Related Aberration or Balancer
Aberration
Balancer
Stocks ( 0 )

Linkouts
Synonyms & Secondary IDs
Reported As
Symbol Synonym	FBti0019985 (Deloger et al., 2009, González et al., 2008) roo{}793 (Kaminker et al., 2002, FlyBase, 1992-, ) TE19985 (FlyBase, 1992-)
Secondary FlyBase IDs

References ( 7 )
Research paper	Fiston-Lavier et al., 2011, Nucleic Acids Res. 39(6): e36 T-lex: a program for fast and accurate assessment of transposable element presence using next-generation sequencing data. [FBrf0213293] Deloger et al., 2009, Gene 439(1-2): 55--62 Identification of expressed transposable element insertions in the sequenced genome of Drosophila melanogaster. [FBrf0207990] González et al., 2008, PLoS Biol. 6(10): e251 High rate of recent transposable element-induced adaptation in Drosophila melanogaster. [FBrf0206197] Quesneville et al., 2005, PLoS Comput. Biol. 1(2): e22 Combined evidence annotation of transposable elements in genome sequences. [FBrf0186342] Kaminker et al., 2002, Genome Biol. 3(12): RESEARCH0084 The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective. [FBrf0155828]
Personal communication to FlyBase	Quesneville et al., 2005.6.22, r4 TE data. r4 TE data. [FBrf0184336]
FlyBase analysis	FlyBase, 1992-, FlyBase curation. FlyBase curation. [FBrf0105495]