A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{SUPor-P}dikarKG00884 Insertion

General Information
Symbol Dmel\P{SUPor-P}dikarKG00884 Species D. melanogaster
Name FlyBase ID FBti0021235
Feature type transposable_element_insertion_site
Description
Inserted element P{SUPor-P} Expression data
Affected gene(s) dikar Viability / fertility viable, fertile
Causes allele(s) dikarKG00884 Stock availability 1 publicly available
LINE ID KG00884
Genomic Location
Chromosomal location 3L ( 65C3 ) Sequence location 3L:6,735,543..6,735,543 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0035984 FBti0109323 FBti0102919 FBti0021235 FBti0070357 FBti0102607 FBti0109896 FBti0043579 FBti0056792 FBti0046975 FBti0053424 FBti0103790 FBti0111168 FBti0100349 FBti0102814 FBti0021911 FBti0112583 FBti0072553
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{SUPor-P}; created and vetted by the Gene Disruption Project (GDP). The P{SUPor-P} construct carries two visible markers: a w[+mC] mini-white marker flanked by su(Hw)-binding sites, designed to reduce the variablity of the phenotype of the white gene marker due position effects, in addition to the mini-yellow marker y[+mDint2].
(Bellen et al., 2004)
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Description
What does this section display?
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What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3L:6,735,543..6,735,543 [+]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
65C3 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
65C3 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
BH614928
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{SUPor-P}
Location-dependent
role
Size 11.467Kb
Associated alleles
gypsy\su(Hw)BR430
wBR.E.BR
y+mDint2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
dikar
(Gene Disruption Project members, 2001-, Keuling et al., 2007)
hide Alleles and Phenotypes
Causes alleles
dikarKG00884
(Gene Disruption Project members, 2001-, Keuling et al., 2007)
Lethality
References
viable
(Gene Disruption Project members, 2001-, Keuling et al., 2007)
Sterility
References
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
Homozygotes are viable and appear phenotypically normal.
(Keuling et al., 2007)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
KG00884
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
13156
y1 w67c23; P{SUPor-P}dikarKG00884 ry506
hide Linkouts
hide Comments
Location 3L:6716390-6716391 confirmed by FlyBase alignment of dbGSS accession BH614928 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
KG00884
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
P{SUPor-P}CG10115KG00884
(FlyBase, 1992-)
P{SUPor-P}CG32393KG00884
(FlyBase, 1992-)
P{SUPor-P}dikarKG00884
(FlyBase, 2005, FlyBase, 1992-, Keuling et al., 2007, )
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Keuling et al., 2007, Genome 50(8): 767--777
Mutation analysis of Drosophila dikar/CG32394, homologue of the chromatin-remodelling gene CECR2. [FBrf0201526]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]