A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{SUPor-P}C1GalTAKG02976 Insertion

General Information
Symbol Dmel\P{SUPor-P}C1GalTAKG02976 Species D. melanogaster
Name FlyBase ID FBti0021549
Feature type transposable_element_insertion_site
Description
Inserted element P{SUPor-P} Expression data
Affected gene(s) C1GalTA Viability / fertility viable, fertile
Causes allele(s) C1GalTAKG02976 Stock availability 1 publicly available
LINE ID KG02976
Genomic Location
Chromosomal location 2L ( 29F5 ) Sequence location 2L:8,950,716..8,950,716 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0063777 FBti0041243 FBti0047811 FBti0052422 FBti0047736 FBti0066807 FBti0066880 FBti0057849 FBti0147232 FBti0068525 FBti0043825 FBti0021549 FBti0124672 FBti0053899 FBti0103079 FBti0035510 FBti0010799 FBti0104558 FBti0044959 FBti0111600 FBti0109534 FBti0067212 FBti0124673_2 FBti0124673_1 FBti0106181 FBti0018845 FBti0029935 FBti0029526 FBti0124674
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{SUPor-P}; created and vetted by the Gene Disruption Project (GDP). The P{SUPor-P} construct carries two visible markers: a w[+mC] mini-white marker flanked by su(Hw)-binding sites, designed to reduce the variablity of the phenotype of the white gene marker due position effects, in addition to the mini-yellow marker y[+mDint2].
(Bellen et al., 2004)
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:8,950,716..8,950,716 [-]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
29F5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
29F6 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
BH740800
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{SUPor-P}
Location-dependent
role
Size 11.467Kb
Associated alleles
gypsy\su(Hw)BR430
wBR.E.BR
y+mDint2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
C1GalTA
(Gene Disruption Project members, 2001-, Lin et al., 2008, Yoshida et al., 2008)
hide Alleles and Phenotypes
Causes alleles
C1GalTAKG02976
(Gene Disruption Project members, 2001-, Lin et al., 2008, Yoshida et al., 2008)
Lethality
References
viable
(Gene Disruption Project members, 2001-, Lin et al., 2008)
Sterility
References
fertile
(Gene Disruption Project members, 2001-, Lin et al., 2008)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
Homozygotes appear morphologically normal.
(Lin et al., 2008)
Homozygotes develop normally.
(Yoshida et al., 2008)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
KG02976
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
13500
y1 w67c23; P{SUPor-P}C1GalTAKG02976
hide Linkouts
hide Comments
Location 2L:8950716-8950717 confirmed by FlyBase alignment of dbGSS accession BH740800 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
KG02976
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
P{SUPor-P}C1GalTAKG02976
 
P{SUPor-P}CG9520KG02976
(FlyBase, 2005, FlyBase, 1992-)
PKG02976
(Lin et al., 2008)
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Lin et al., 2008, Dev. Dyn. 237(12): 3703--3714
Requirement for a core 1 galactosyltransferase in the Drosophila nervous system. [FBrf0207265]
Yoshida et al., 2008, Glycobiology 18(12): 1094--1104
Identification of the Drosophila core 1 beta1,3-galactosyltransferase gene that synthesizes T antigen in the embryonic central nervous system and hemocytes. [FBrf0207249]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]