A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{SUPor-P}babosKG05061 Insertion

General Information
Symbol Dmel\P{SUPor-P}babosKG05061 Species D. melanogaster
Name FlyBase ID FBti0021903
Feature type transposable_element_insertion_site
Description
Inserted element P{SUPor-P} Expression data
Affected gene(s) babos Viability / fertility viable, fertile
Causes allele(s) babosKG05061 Stock availability 1 publicly available
LINE ID KG05061
Genomic Location
Chromosomal location 2R ( 58D4 ) Sequence location 2R:18,289,535..18,289,535 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0143945 FBti0143800 FBti0033088 FBti0150186 FBti0029419 FBti0021903 FBti0006330 FBti0107439 FBti0103070 FBti0036936 FBti0036878 FBti0036417 FBti0033852 FBti0070589 FBti0006731 FBti0108624 FBti0053924 FBti0059413 FBti0039695 FBti0006722 FBti0107384 FBti0108616 FBti0108322 FBti0007706 FBti0029167 FBti0054960 FBti0033369 FBti0103496 FBti0110139 FBti0100878 FBti0125368_1 FBti0125368_2 FBti0033056 FBti0046218 FBti0132550 FBti0037611 FBti0052848 FBti0024920 FBti0029553 FBti0074664 FBti0105927 FBti0011181 FBti0044703 FBti0116015 FBti0054592
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{SUPor-P}; created and vetted by the Gene Disruption Project (GDP). The P{SUPor-P} construct carries two visible markers: a w[+mC] mini-white marker flanked by su(Hw)-binding sites, designed to reduce the variablity of the phenotype of the white gene marker due position effects, in addition to the mini-yellow marker y[+mDint2].
(Bellen et al., 2004)
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Description
What does this section display?
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What does this section not display?
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:18,289,535..18,289,535 [+]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
58D4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
58D7 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
BH759559
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{SUPor-P}
Location-dependent
role
Size 11.467Kb
Associated alleles
gypsy\su(Hw)BR430
wBR.E.BR
y+mDint2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
babos
(Gene Disruption Project members, 2001-, Yuan et al., 2011)
hide Alleles and Phenotypes
Causes alleles
babosKG05061
(Gene Disruption Project members, 2001-, Yuan et al., 2011)
Lethality
References
viable
(Gene Disruption Project members, 2001-)
Sterility
References
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
KG05061
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
13626
y1 w67c23; P{SUPor-P}babosKG05061
hide Linkouts
hide Comments
Location 2R:17909612-17909613 confirmed by FlyBase alignment of dbGSS accession BH759559 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
CG3624<up>KG05061</up>
(Yuan et al., 2011)
KG05061
(Gene Disruption Project members, 2001-, Verstreken et al., 2003, FlyBase, 1992-)
P{SUPor-P}babosKG05061
 
P{SUPor-P}CG3624KG05061
(FlyBase, 2005, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 8 )
Research paper
Thomas et al., 2013, G3 (Bethesda) 3(1): 91--99
Common Variants of Drosophila melanogaster Cyp6d2 Cause Camptothecin Sensitivity and Synergize With Loss of Brca2. [FBrf0220487]
Yuan et al., 2011, Science 333(6048): 1458--1462
Light-induced structural and functional plasticity in Drosophila larval visual system. [FBrf0215276]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Verstreken et al., 2003, Neuron 40(4): 733--748
Synaptojanin is recruited by endophilin to promote synaptic vesicle uncoating. [FBrf0167964]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]