A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{SUPor-P}scafKG05129 Insertion

General Information
Symbol Dmel\P{SUPor-P}scafKG05129 Species D. melanogaster
Name FlyBase ID FBti0021918
Feature type transposable_element_insertion_site
Description
Inserted element P{SUPor-P} Expression data
Affected gene(s) scaf Viability / fertility viable, fertile
Causes allele(s) scafKG05129 Stock availability 1 publicly available
LINE ID KG05129
Genomic Location
Chromosomal location 2R ( 41F7 ) Sequence location 2R:1,569,082..1,569,082 [-]
Map ( GBrowse ) detailed view FBti0063143 FBti0063144 FBti0063759 FBti0063149 FBti0037907 FBti0051063 FBti0067856 FBti0145282 FBti0021918 FBti0058724 FBti0049887 FBti0044976
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
2R:1,569,082..1,569,082 [-]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
41F7 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
41F9 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
BH759575
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{SUPor-P}
Location-dependent
role
Size 11.467Kb
Associated alleles
gypsy\su(Hw)BR430
wBR.E.BR
y+mDint2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
scaf
(Gene Disruption Project members, 2001-, Rousset et al., 2010)
hide Alleles and Phenotypes
Causes alleles
scafKG05129
(Gene Disruption Project members, 2001-, Myster et al., 2004, Rousset et al., 2010)
Lethality
References
viable
(Gene Disruption Project members, 2001-)
Sterility
References
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
KG05129
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
13631
y1 w67c23; P{SUPor-P}scafKG05129
hide Linkouts
hide Comments
Location 2R:1188965-1188966 confirmed by FlyBase alignment of dbGSS accession BH759575 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
KG05129
(Gene Disruption Project members, 2001-, FlyBase, 1992-, Rousset et al., 2010)
P{SUPor-P}CG11066KG05129
(FlyBase, 1992-)
P{SUPor-P}scafKG05129
 
P{SUPor-P}scarfaceKG05129
(FlyBase, 2005, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Rousset et al., 2010, Development 137(13): 2177--2186
The Drosophila serine protease homologue Scarface regulates JNK signalling in a negative-feedback loop during epithelial morphogenesis. [FBrf0211045]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Myster et al., 2004, Genetics 166(2): 807--822
Genetic and bioinformatic analysis of 41C and the 2R heterochromatin of Drosophila melanogaster: a window on the heterochromatin-euchromatin junction. [FBrf0174713]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]