A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{SUPor-P}psqKG02404 Insertion

General Information
Symbol Dmel\P{SUPor-P}psqKG02404 Species D. melanogaster
Name FlyBase ID FBti0023107
Feature type transposable_element_insertion_site
Description
Inserted element P{SUPor-P} Expression data
Affected gene(s) psq Viability / fertility viable, fertile
Causes allele(s) psqKG02404 Stock availability 1 publicly available
LINE ID KG02404
Genomic Location
Chromosomal location 2R ( 47A13 ) Sequence location 2R:6,446,467..6,446,467 [-]
Map ( GBrowse ) detailed view FBti0062278 FBti0046181 FBti0065486 FBti0046198 FBti0066483 FBti0064787 FBti0043138 FBti0055666 FBti0068980 FBti0072802 FBti0108147 FBti0055618 FBti0069563 FBti0110863 FBti0053098 FBti0044331 FBti0070586 FBti0108289 FBti0051742 FBti0072143 FBti0048993 FBti0023107 FBti0066736 FBti0103106 FBti0035870 FBti0039970 FBti0110954 FBti0112678 FBti0113475 FBti0046686 FBti0066635 FBti0125090_2 FBti0125090_1 FBti0045415 FBti0066735 FBti0067066 FBti0112358 FBti0024823 FBti0058918 FBti0113317
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Description
What does this section display?
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:6,446,467..6,446,467 [-]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
47A13 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
47A13 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
BH809418
(Gene Disruption Project members, 2001-, FlyBase, 1992-)
hide Inserted Element
Construct P{SUPor-P}
Location-dependent
role
Size 11.467Kb
Associated alleles
gypsy\su(Hw)BR430
wBR.E.BR
y+mDint2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
psq
(Gene Disruption Project members, 2001-, Grillo et al., 2011)
hide Alleles and Phenotypes
Causes alleles
psqKG02404
(Gene Disruption Project members, 2001-, Grillo et al., 2011)
Lethality
References
viable
(Gene Disruption Project members, 2001-)
Sterility
References
female sterile
(Grillo et al., 2011)
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
embryonic abdominal segment 8 | maternal effect
(Grillo et al., 2011)
filzkorper | maternal effect
(Grillo et al., 2011)
hide Detailed Description
Statement
Reference
psq[KG02404] fails to complement the female sterility of psq[rum].
(Grillo et al., 2011)
Embryos derived from psq[KG02404]/psq[rum] mutant females display terminal defects.
(Grillo et al., 2011)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
KG02404
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
13935
y1; P{SUPor-P}psqKG02404/CyO; ry506
hide Linkouts
hide Comments
Location 2R:6070775-6070776 confirmed by FlyBase alignment of dbGSS accession BH809418 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
KG02404
(Gene Disruption Project members, 2001-, FlyBase, 1992-, Grillo et al., 2011)
KG2404
(Grillo et al., 2011)
P{SUPor-P}psqKG02404
(FlyBase, 2005, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 5 )
Research paper
Grillo et al., 2011, Genetics 187(2): 513--521
Control of Germline torso Expression by the BTB/POZ Domain Protein Pipsqueak Is Required for Embryonic Terminal Patterning in Drosophila. [FBrf0213010]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]