A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{SUPor-P}Sox15KG09145 Insertion

General Information
Symbol Dmel\P{SUPor-P}Sox15KG09145 Species D. melanogaster
Name FlyBase ID FBti0024248
Feature type transposable_element_insertion_site
Description
Inserted element P{SUPor-P} Expression data
Affected gene(s) Sox15 Viability / fertility
Causes allele(s) Sox15KG09145 Stock availability 2 publicly available
LINE ID KG09145
Genomic Location
Chromosomal location 2R ( 50E4 ) Sequence location 2R:10,096,285..10,096,285 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0018945 FBti0075317 FBti0024248 FBti0125167_1 FBti0125167_2 FBti0054645 FBti0024605 FBti0072735 FBti0007652
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{SUPor-P}; created and vetted by the Gene Disruption Project (GDP). The P{SUPor-P} construct carries two visible markers: a w[+mC] mini-white marker flanked by su(Hw)-binding sites, designed to reduce the variablity of the phenotype of the white gene marker due position effects, in addition to the mini-yellow marker y[+mDint2].
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:10,096,285..10,096,285 [-]
Orientation
Cytological location
(computed by FlyBase)
50E4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
50E6 (reported as inferred from sequence location)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{SUPor-P}
Location-dependent
role
Size 11.467Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
partially lethal - majority die | recessive
Sterility
References
hide Phenotype Manifest In
wing hinge primordium
wing sclerite
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Statement
Reference
In wg[spd-fg], Sox15[KG09145] double mutant third instar larval wing imaginal discs, the distal hinge region is reduced in size compared to either single mutant. The rate of hinge-specific apoptosis is similar in wg[spd-fg], Sox15[KG09145] double mutant and Sox15[KG09145] single mutant L3 wing discs.
Most homozygous Sox15[KG09145] flies die as pharate adults. The homozygous Sox15[KG09145] escapers are weak and display held-out wings. The held-out-wing phenotype is the result of abnormalities in proximal hinge structures, such as the sclerites, the alula and the costa. Sox15[KG09145] mutant third instar larval wing imaginal discs show hinge overgrowth that causes extra folds both dorsally and ventrally. There is an increase in cell proliferation in the hinge region of Sox15[KG09145] mutant L3 wing imaginal discs relative to the wild-type. The rate of apoptotic cell death is also increased in Sox15[KG09145] mutant wing discs in the hinge region. The wing pouch and body wall regions appear unaffected in Sox15[KG09145] mutant third instar larval wing imaginal discs.
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
Kyoto
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hide Comments
Location 2R:9723643-9723644 confirmed by FlyBase alignment of dbGSS accession BZ286333 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{SUPor-P}Sox15KG09145
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Dichtel-Danjoy et al., 2009, Development 136(5): 761--769
SoxF is part of a novel negative-feedback loop in the wingless pathway that controls proliferation in the Drosophila wing disc. [FBrf0206770]
Miller et al., 2009, Dev. Biol. 329(2): 386--399
Complex interplay of three transcription factors in controlling the tormogen differentiation program of Drosophila mechanoreceptors. [FBrf0207969]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]