A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{lacW}bsfSH1181 Insertion

General Information
Symbol Dmel\P{lacW}bsfSH1181 Species D. melanogaster
Name FlyBase ID FBti0025967
Feature type transposable_element_insertion_site
Description
Inserted element P{lacW} Expression data
Affected gene(s) bsf, l(2)SH1181 Viability / fertility
Causes allele(s) bsfSH1181, l(2)SH1181SH1181 Stock availability 1 publicly available
LINE ID SH1181
Genomic Location
Chromosomal location 2L ( 36F5 ) Sequence location 2L:18,452,250..18,452,250 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0061980 FBti0020896 FBti0005275 FBti0026390 FBti0068875 FBti0071027 FBti0026041 FBti0017628 FBti0055791 FBti0054870 FBti0028397 FBti0025967 FBti0102520 FBti0076134 FBti0107837 FBti0039504 FBti0021230 FBti0044056 FBti0066153 FBti0066162 FBti0039242 FBti0046453 FBti0029787
Member of Large Scale Dataset(s)
Dataset

A set of mutant stocks derived by insertional mutagenesis using the P-element construct P{lacW}; most lines have a lethal phenotype. The P{lacW} construct carries a w[+mC] mini-white visible marker, Ecol\lacZ enhancer trap sequences, and bacterial sequences that allow plasmid rescue (FBrf0049800).
Insertion lines from this collection were assessed for inclusion in the Gene Disruption Project collection.
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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Chromosome (arm)
Sequence Location
2L:18,452,250..18,452,250 [-]
Orientation
Cytological location
(computed by FlyBase)
36F5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
36F5_r5 (reported as inferred from sequence location)
36F7 (reported as inferred from sequence location)
Comments concerning
location
Genomic location previously reported as 2L:18452243..18452287.
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{lacW}
Location-dependent
role
lacZ enhancer trap
Size 10.691Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
lethal | recessive
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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hide Comments
Location 2L:18448171-18448217 confirmed by FlyBase alignment of dbGSS accession AB082414 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
l(2)SH1181-FRT40
P{lacW}bsfSH1181
 
P{lacW}l(2)SH1181SH1181
Secondary FlyBase IDs
hide References ( 11 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Geng and MacDonald, 2007, Fly 1(5): 259--267
Identification of genes that influence gurken expression. [FBrf0205043]
Oh et al., 2003, Genetics 163(1): 195--201
A P-element insertion screen identified mutations in 455 novel essential genes in Drosophila. [FBrf0155812]
Bier et al., 1989, Genes Dev. 3: 1273--1287
Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector. [FBrf0049800]
Supplementary material
Link et al., 2007, J. Cell Biol. 178(4):
Link et al., 2007. Supplemental Table 2. [FBrf0218017]
Oh et al., 2003, Genetics 163(1):
Table S1. [FBrf0157097]
Personal communication to FlyBase
Levis and Carlson, 2011.9.12, Updated location data for SH lines
Updated location data for SH lines [FBrf0215563]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations.
Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]