A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{5HPw+}CG34454A212 Insertion

General Information
Symbol Dmel\PBac{5HPw+}CG34454A212 Species D. melanogaster
Name FlyBase ID FBti0037644
Feature type transposable_element_insertion_site
Description
Inserted element PBac{5HPw+} Expression data
Affected gene(s) CG34454 Viability / fertility fertile, viable
Causes allele(s) CG34454A212 Stock availability 1 publicly available
LINE ID PA07730
Genomic Location
Chromosomal location 3L ( 61B2 ) Sequence location 3L:231,923..231,923 [+]
Map ( GBrowse ) detailed view FBti0061977 FBti0056997 FBti0100947 FBti0105085 FBti0125448 FBti0099991 FBti0065942 FBti0011681 FBti0056884 FBti0107568 FBti0059113 FBti0109267 FBti0111164 FBti0024112 FBti0044172 FBti0065286 FBti0126528 FBti0070370 FBti0034577 FBti0072513 FBti0048094 FBti0125449_2 FBti0125449_1 FBti0037644 FBti0143070
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
3L:231,923..231,923 [+]
(Berkeley Drosophila Genome Project, 2006.4.26)
Orientation
Cytological location
(computed by FlyBase)
61B2 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
61B2 (reported as inferred from sequence location)
(Berkeley Drosophila Genome Project, 2006.4.26)
Comments concerning
location
hide Sequence Data
Flanking sequence
DX575125
(Berkeley Drosophila Genome Project, 2006.4.26)
DX575126
(Berkeley Drosophila Genome Project, 2006.4.26)
DX575677
(Berkeley Drosophila Genome Project, 2006.4.26)
hide Inserted Element
Construct PBac{5HPw+}
Location-dependent
role
Size 6.938Kb
Associated alleles
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG34454
(FlyBase Curators, 2008)
hide Alleles and Phenotypes
Causes alleles
CG34454A212
(FlyBase Curators, 2008)
Lethality
References
viable
(Ring and Garza, 2003.6.10)
Sterility
References
fertile
(Ring and Garza, 2003.6.10)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
PA07730
(Berkeley Drosophila Genome Project, 2006.4.26)
Origin as a multiple insertion line
N
(Berkeley Drosophila Genome Project, 2006.4.26)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
16068
y1 w1118; PBac{5HPw+}CG34454A212/TM2, rySC
hide Linkouts
hide Comments
Resequencing confirmed original insertion site.
(Ring and Garza, 2003.6.10)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{5HPw+}A212
(FlyBase, 1992-)
PBac{5HPw+}CG34454A212
 
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Berkeley Drosophila Genome Project, 2006.4.26, BDGP TI submission.
BDGP TI submission. [FBrf0188739]
Ring and Garza, 2003.6.10, PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac.
PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac. [FBrf0159884]
FlyBase analysis
FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations.
Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Thesis
Ring, 2001, Ph.D. Thesis, Florida State University, FL: xii + 219pp
Functional analysis of the Drosophila genome using transposable elements. [FBrf0152434]