A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\PBac{5HPw+}MFS18A311 Insertion

General Information
Symbol Dmel\PBac{5HPw+}MFS18A311 Species D. melanogaster
Name FlyBase ID FBti0037666
Feature type transposable_element_insertion_site
Description
Inserted element PBac{5HPw+} Expression data
Affected gene(s) MFS18 Viability / fertility fertile, viable
Causes allele(s) MFS18A311 Stock availability 1 publicly available
LINE ID PA08021
Genomic Location
Chromosomal location 2L ( 24F3 ) Sequence location 2L:4,449,156..4,449,156 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0035467 FBti0105206 FBti0040950 FBti0007786 FBti0124557 FBti0023452 FBti0011074 FBti0018807 FBti0033677 FBti0110181 FBti0124558 FBti0038895 FBti0048695 FBti0037666 FBti0021441 FBti0029672 FBti0040024 FBti0105141 FBti0105930 FBti0105224 FBti0066006 FBti0042124 FBti0124559_1 FBti0124559_2 FBti0026068 FBti0112074 FBti0112552
Member of Large Scale Dataset(s)
Dataset

PBac{5HPw[+]} is a 5' half P-element construct marked with the w[+mC] mini-white marker nested within a Tni\piggyBac-based construct; mobilization requires a source of Tni\piggyBac transposase.
A set of transgenic insertion stocks derived by TE mobilization using the Tni\piggyBac-based construct PBac{5HPw[+]}.
(Ring and Garza, 2003.6.10, Bellen et al., 2004)
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:4,449,156..4,449,156 [-]
(Berkeley Drosophila Genome Project, 2006.4.26)
Orientation
Cytological location
(computed by FlyBase)
24F3 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
24F3 (reported as inferred from sequence location)
(Berkeley Drosophila Genome Project, 2006.4.26)
Comments concerning
location
hide Sequence Data
Flanking sequence
DX575168
(Berkeley Drosophila Genome Project, 2006.4.26)
DX575169
(Berkeley Drosophila Genome Project, 2006.4.26)
DX575695
(Berkeley Drosophila Genome Project, 2006.4.26)
hide Inserted Element
Construct PBac{5HPw+}
Location-dependent
role
Size 6.938Kb
Associated alleles
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
MFS18
(Bloomington Drosophila Stock Center, 2004.11.7)
hide Alleles and Phenotypes
Causes alleles
MFS18A311
(Bloomington Drosophila Stock Center, 2004.11.7)
Lethality
References
viable
(Ring and Garza, 2003.6.10)
Sterility
References
fertile
(Ring and Garza, 2003.6.10)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
PA08021
(Berkeley Drosophila Genome Project, 2006.4.26)
Origin as a multiple insertion line
N
(Berkeley Drosophila Genome Project, 2006.4.26)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
16090
y1 w1118; PBac{5HPw+}MFS18A311
hide Linkouts
hide Comments
Resequencing confirmed original insertion site.
(Ring and Garza, 2003.6.10)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{5HPw+}A311
(FlyBase, 1992-)
PBac{5HPw+}CG15438A311
(FlyBase, 1992-)
PBac{5HPw+}MFS18A311
 
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Berkeley Drosophila Genome Project, 2006.4.26, BDGP TI submission.
BDGP TI submission. [FBrf0188739]
Bloomington Drosophila Stock Center, 2004.11.7, Garza insertion alleles that are not in FlyBase.
Garza insertion alleles that are not in FlyBase. [FBrf0179791]
Ring and Garza, 2003.6.10, PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac.
PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac. [FBrf0159884]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]
Thesis
Ring, 2001, Ph.D. Thesis, Florida State University, FL: xii + 219pp
Functional analysis of the Drosophila genome using transposable elements. [FBrf0152434]