A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\PBac{5HPw+}CG5794A459 Insertion

General Information
Symbol Dmel\PBac{5HPw+}CG5794A459 Species D. melanogaster
Name FlyBase ID FBti0037697
Feature type transposable_element_insertion_site
Description
Inserted element PBac{5HPw+} Expression data
Affected gene(s) CG5794 Viability / fertility
Causes allele(s) CG5794A459 Stock availability 1 publicly available
LINE ID PA08171
Genomic Location
Chromosomal location 3R ( 96A13 ) Sequence location 3R:20,464,974..20,464,974 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0107148 FBti0111572 FBti0029988 FBti0111314 FBti0106149 FBti0070925 FBti0034601 FBti0106457 FBti0068791 FBti0128179 FBti0101999 FBti0047146 FBti0037697
Member of Large Scale Dataset(s)
Dataset

PBac{5HPw[+]} is a 5' half P-element construct marked with the w[+mC] mini-white marker nested within a Tni\piggyBac-based construct; mobilization requires a source of Tni\piggyBac transposase.
A set of transgenic insertion stocks derived by TE mobilization using the Tni\piggyBac-based construct PBac{5HPw[+]}.
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Description
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FB2013_03
FB2013_02
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Chromosome (arm)
Sequence Location
3R:20,464,974..20,464,974 [+]
Orientation
Cytological location
(computed by FlyBase)
96A13 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
96A13 (reported as inferred from sequence location)
Comments concerning
location
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Flanking sequence
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Construct PBac{5HPw+}
Location-dependent
role
Size 6.938Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
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Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
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Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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hide Comments
Resequencing confirmed original insertion site.
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{5HPw+}A459
PBac{5HPw+}CG5794A459
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Berkeley Drosophila Genome Project, 2006.4.26, BDGP TI submission.
BDGP TI submission. [FBrf0188739]
Ring and Garza, 2003.6.10, PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac.
PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac. [FBrf0159884]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations.
Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]
Thesis
Ring, 2001, Ph.D. Thesis, Florida State University, FL: xii + 219pp
Functional analysis of the Drosophila genome using transposable elements. [FBrf0152434]