A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Dmel\PBac{3HPy+}Arf79FC005 Insertion

General Information
Symbol Dmel\PBac{3HPy+}Arf79FC005 Species D. melanogaster
Name FlyBase ID FBti0037825
Feature type transposable_element_insertion_site Created / Updated 2003-09-08/2005-01-05
Description
Inserted element PBac{3HPy+} Localized function
Affected gene(s) Arf79F Expression data
Causes allele(s) Arf79FC005 Viability / fertility
LINE ID PC09014 Stock availability
Genomic Location
Chromosomal location 3L ( 80B1 ) Sequence location 3L:22,863,871..22,863,871 [+]
Map ( GBrowse ) detailed view FBti0060701 FBti0020212 FBti0060702 FBti0029645 FBti0036535 FBti0064759 FBti0044054 FBti0053113 FBti0034763 FBti0072473 FBti0035975 FBti0011636 FBti0018682 FBti0035942 FBti0042911 FBti0037825 FBti0054250 FBti0039889 FBti0066143 FBti0033525 FBti0030101 FBti0033737 FBti0029898 FBti0024887 FBti0072846 FBti0027029 FBti0027066 FBti0047287 FBti0067940 FBti0025621 FBti0018669 FBti0050649 FBti0047844 FBti0046213 FBti0023534 FBti0067567
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3L:22,863,871..22,863,871 [+]
(Berkeley Drosophila Genome Project, 2006.4.26)
Orientation
Cytological location
(computed by FlyBase)
80B1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
80B2 (reported as inferred from sequence location)
(Berkeley Drosophila Genome Project, 2006.4.26)
Chromosome in situ
hide Sequence Data
Flanking sequence
DX575908
(Berkeley Drosophila Genome Project, 2006.4.26)
hide Inserted Element
Construct PBac{3HPy+}
Location-dependent
role 		 
Size 8.198Kb
Associated alleles
y+mDint2
Molecular map
Transposon class
Element type
hide Affected Gene(s)
Insertion within gene
Insertion may
affect gene
Arf79F
(Berkeley Drosophila Genome Project, 2006.4.26)
Orientation
(relative to gene)
Gene
Orientation
References
 
 
 
hide Alleles and Phenotypes
Causes alleles
Arf79FC005
(Bloomington Drosophila Stock Center, 2004.11.7)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Stage
Tissue/Position
Reference
Additional Information
Statement
Reference
Assay mode
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
PC09014
(Berkeley Drosophila Genome Project, 2006.4.26)
Origin as a multiple insertion line
N
(Berkeley Drosophila Genome Project, 2006.4.26)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
16251
y1 w1118; PBac{3HPy+}Arf79FC005/TM3, Sb1 Ser1
hide Linkouts
hide Comments
Resequencing confirmed original insertion site.
(Ring and Garza, 2003.6.10)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{3HPy+}Arf79FC005
(FlyBase, 1992-)
PBac{3HPy+}C005
(FlyBase, 1992-)
Secondary FlyBase IDs
    hide References ( 7 )
    Research paper
    Bellen et al., 2004, Genetics 167(2): 761--781
    The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
    Murtagh et al., 1993, Biochemistry 32(23): 6011--6018
    Molecular characterization of a conserved, guanine nucleotide-dependent ADP-ribosylation factor in Drosophila melanogaster. [FBrf0057832]
    Personal communication to FlyBase
    Berkeley Drosophila Genome Project, 2006.4.26, BDGP TI submission.
    BDGP TI submission. [FBrf0188740]
    Bloomington Drosophila Stock Center, 2004.11.7, Garza insertion alleles that are not in FlyBase.
    Garza insertion alleles that are not in FlyBase. [FBrf0179791]
    Ring and Garza, 2003.6.10, PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac.
    PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac. [FBrf0159884]
    FlyBase analysis
    FlyBase, 1992-, FlyBase curation
    FlyBase curation. [FBrf0105495]
    Thesis
    Ring, 2001, Ph.D. Thesis, Florida State University, FL: xii + 219pp
    Functional analysis of the Drosophila genome using transposable elements. [FBrf0152434]