A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Dmel\PBac{3HPy+}tamC021 Insertion

General Information
Symbol Dmel\PBac{3HPy+}tamC021 Species D. melanogaster
Name FlyBase ID FBti0037831
Feature type transposable_element_insertion_site Created / Updated 2003-09-08/2008-06-26
Description
Inserted element PBac{3HPy+} Localized function
Affected gene(s) tam Expression data
Causes allele(s) tamC021 Viability / fertility
LINE ID PC07785 Stock availability
Genomic Location
Chromosomal location 2L ( 34D1 ) Sequence location 2L:13,827,701..13,827,718 [+]
Map ( GBrowse ) detailed view FBti0067938 FBti0052437 FBti0100832 FBti0039078 FBti0048568 FBti0072809 FBti0037831 FBti0051719 FBti0067095 FBti0039326 FBti0006260 FBti0026321 FBti0065184 FBti0065708 FBti0101143 FBti0021285 FBti0044978 FBti0049636
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:13,827,701..13,827,718 [+]
(Berkeley Drosophila Genome Project, 2006.4.26)
Orientation
Cytological location
(computed by FlyBase)
34D1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
34D6 (reported as inferred from sequence location)
(Berkeley Drosophila Genome Project, 2006.4.26)
Chromosome in situ
hide Sequence Data
Flanking sequence
DX575832
(Berkeley Drosophila Genome Project, 2006.4.26)
hide Inserted Element
Construct PBac{3HPy+}
Location-dependent
role 		 
Size 8.198Kb
Associated alleles
y+mDint2
Molecular map
Transposon class
Element type
hide Affected Gene(s)
Insertion within gene
Insertion may
affect gene
tam
(Berkeley Drosophila Genome Project, 2006.4.26, Curators, 2008)
Orientation
(relative to gene)
Gene
Orientation
References
 
 
 
hide Alleles and Phenotypes
Causes alleles
tamC021
(Curators, 2008)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Stage
Tissue/Position
Reference
Additional Information
Statement
Reference
Assay mode
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
PC07785
(Berkeley Drosophila Genome Project, 2006.4.26)
Origin as a multiple insertion line
N
(Berkeley Drosophila Genome Project, 2006.4.26)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
16257
y1 w1118; PBac{3HPy+}C021/CyO
hide Linkouts
hide Comments
Resequencing confirmed original insertion site.
(Ring and Garza, 2003.6.10)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{3HPy+}C021
(FlyBase, 1992-)
PBac{3HPy+}tamC021
(FlyBase, 1992-)
Secondary FlyBase IDs
    hide References ( 6 )
    Research paper
    Bellen et al., 2004, Genetics 167(2): 761--781
    The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
    Personal communication to FlyBase
    Berkeley Drosophila Genome Project, 2006.4.26, BDGP TI submission.
    BDGP TI submission. [FBrf0188740]
    Ring and Garza, 2003.6.10, PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac.
    PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac. [FBrf0159884]
    FlyBase analysis
    Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations.
    Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955]
    FlyBase, 1992-, FlyBase curation
    FlyBase curation. [FBrf0105495]
    Thesis
    Ring, 2001, Ph.D. Thesis, Florida State University, FL: xii + 219pp
    Functional analysis of the Drosophila genome using transposable elements. [FBrf0152434]