A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{3HPy+}CG32000C034 Insertion

General Information
Symbol Dmel\PBac{3HPy+}CG32000C034 Species D. melanogaster
Name FlyBase ID FBti0037836
Feature type transposable_element_insertion_site
Description
Inserted element PBac{3HPy+} Expression data
Affected gene(s) CG32000 Viability / fertility fertile, viable
Causes allele(s) CG32000C034 Stock availability 1 publicly available
LINE ID PC07797
Genomic Location
Chromosomal location 4 ( 102A4 ) Sequence location 4:157,142..157,186 [+]
Map ( GBrowse ) detailed view FBti0019474 FBti0063370 FBti0063371 FBti0019475 FBti0062701 FBti0062704 FBti0063376 FBti0063373 FBti0062710 FBti0062712 FBti0062831 FBti0062714 FBti0062716 FBti0062718 FBti0062720 FBti0019476 FBti0062880 FBti0101590 FBti0075482 FBti0110669 FBti0053167 FBti0049999 FBti0047723 FBti0066383 FBti0047500 FBti0049892 FBti0047580 FBti0037836 FBti0049888 FBti0047344 FBti0047608 FBti0075477
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
4:157,142..157,186 [+]
(Berkeley Drosophila Genome Project, 2006.4.26)
Orientation
Cytological location
(computed by FlyBase)
102A4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
102A7 (reported as inferred from sequence location)
(Berkeley Drosophila Genome Project, 2006.4.26)
Comments concerning
location
hide Sequence Data
Flanking sequence
DX575472
(Berkeley Drosophila Genome Project, 2006.4.26)
DX575837
(Berkeley Drosophila Genome Project, 2006.4.26)
hide Inserted Element
Construct PBac{3HPy+}
Location-dependent
role
Size 8.198Kb
Associated alleles
y+mDint2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG32000
(Berkeley Drosophila Genome Project, 2006.4.26, FlyBase Curators, 2008)
hide Alleles and Phenotypes
Causes alleles
CG32000C034
(FlyBase Curators, 2008)
Lethality
References
viable
(Ring and Garza, 2003.6.10)
Sterility
References
fertile
(Ring and Garza, 2003.6.10)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
PC07797
(Berkeley Drosophila Genome Project, 2006.4.26)
Origin as a multiple insertion line
N
(Berkeley Drosophila Genome Project, 2006.4.26)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
16262
y1 w1118; PBac{3HPy+}CG32000C034/ciD
hide Linkouts
hide Comments
Resequencing results not yet available.
(Ring and Garza, 2003.6.10)
recessive rough eye, reduced eye, and bristle phenotype, all variable
(Ring and Garza, 2003.6.10)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{3HPy+}C034
(FlyBase, 1992-)
PBac{3HPy+}CG32000C034
 
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Berkeley Drosophila Genome Project, 2006.4.26, BDGP TI submission.
BDGP TI submission. [FBrf0188740]
Berkeley Drosophila Genome Project, 2006.4.26, BDGP TI submission.
BDGP TI submission. [FBrf0188739]
Ring and Garza, 2003.6.10, PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac.
PBac Constructs from the Project 'Genome Wide Dispersal of Half-P Elements in Drosophila Using PiggyBac. [FBrf0159884]
FlyBase analysis
FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations.
Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Thesis
Ring, 2001, Ph.D. Thesis, Florida State University, FL: xii + 219pp
Functional analysis of the Drosophila genome using transposable elements. [FBrf0152434]