A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EPgy2}Pex6EY09695 Insertion

General Information
Symbol Dmel\P{EPgy2}Pex6EY09695 Species D. melanogaster
Name FlyBase ID FBti0038944
Feature type transposable_element_insertion_site
Description
Inserted element P{EPgy2} Expression data
Affected gene(s) CG18003, Pex6 Viability / fertility fertile, viable
Causes allele(s) CG18003EY09695, Pex6EY09695 Stock availability 1 publicly available
LINE ID EY09695
Genomic Location
Chromosomal location 2R ( 47C5 ) Sequence location 2R:6,772,272..6,772,272 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0062309 FBti0026261 FBti0034316 FBti0103576 FBti0107026 FBti0106943 FBti0030290 FBti0030313 FBti0106405 FBti0077118 FBti0113283 FBti0111948 FBti0103089 FBti0112986 FBti0005347 FBti0046097 FBti0044177 FBti0042127 FBti0109870 FBti0110710 FBti0040135 FBti0025844 FBti0070822 FBti0018849 FBti0025218 FBti0114804 FBti0051497 FBti0038944 FBti0053460 FBti0125099_1 FBti0125099_2 FBti0109994 FBti0025768 FBti0042089 FBti0108651 FBti0028555 FBti0023199 FBti0027344
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EPgy2}; created and vetted by the Gene Disruption Project (GDP). The P{EPgy2} construct carries two visible markers, the mini-white marker w[+mC] and the mini-yellow marker y[+mDint2], and Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator. The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
Additional P{EPgy2} insertion lines were generated, mapped, and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
(Bellen et al., 2004, Bellen et al., 2011)
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:6,772,272..6,772,272 [+]
(Gene Disruption Project members, 2001-)
Orientation
Cytological location
(computed by FlyBase)
47C5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
47C3 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
CL526135
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct P{EPgy2}
Location-dependent
role
mobile activating element (UASG)
(Bellen et al., 2004)
Size 10.908Kb
Associated alleles
Scer\UAS14x.P\T
TrlBRcRa
w+mC
y+mDint2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG18003
(FlyBase, 1996-, Gene Disruption Project members, 2001-)
Pex6
(FlyBase, 1996-, Gene Disruption Project members, 2001-)
hide Alleles and Phenotypes
Causes alleles
CG18003EY09695
(FlyBase, 1996-, Gene Disruption Project members, 2001-)
Pex6EY09695
(FlyBase, 1996-, Gene Disruption Project members, 2001-)
Lethality
References
viable
(Gene Disruption Project members, 2001-)
Sterility
References
fertile
(Gene Disruption Project members, 2001-)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EY09695
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
17593
y1 w67c23; P{EPgy2}Pex6EY09695 CG18003EY09695
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{EPgy2}CG11919EY09695
(FlyBase, 1992-)
P{EPgy2}CG30019EY09695
(FlyBase, 1992-)
P{EPgy2}EY09695
(FlyBase, 1992-)
P{EPgy2}Pex6EY09695
 
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]