A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{PB}msd1c04570 Insertion

General Information
Symbol Dmel\PBac{PB}msd1c04570 Species D. melanogaster
Name FlyBase ID FBti0041155
Feature type transposable_element_insertion_site
Description
Inserted element PBac{PB} Expression data
Affected gene(s) msd1 Viability / fertility
Causes allele(s) msd1c04570 Stock availability 2 publicly available
LINE ID c04570
Genomic Location
Chromosomal location 3L ( 61F6 ) Sequence location 3L:1,331,667..1,331,667 [-]
Map ( GBrowse ) detailed view FBti0011481 FBti0004954_2 FBti0004954_1 FBti0028655 FBti0041155 FBti0100379 FBti0057785 FBti0052347 FBti0074888 FBti0110739 FBti0034578 FBti0109396 FBti0070376 FBti0076123 FBti0033730 FBti0107918 FBti0107530 FBti0057307 FBti0005463 FBti0111638 FBti0055357 FBti0069960 FBti0016435 FBti0099915 FBti0037524 FBti0070277 FBti0039535 FBti0028351 FBti0043968
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Description
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FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
Orientation
Cytological location
(computed by FlyBase)
61F6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
61F6 (reported as inferred from sequence location)
Comments concerning
location
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Flanking sequence
hide Inserted Element
Construct PBac{PB}
Location-dependent
role
deletion generation component
carries FRT site(s)
Size 7.257Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
Harvard
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hide Comments
Location 3L:1315199-1315200 confirmed by FlyBase alignment of dbGSS accession CZ469348 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
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Reported As
Symbol Synonym
PBac{PB}CG13914c04570
PBac{PB}msd1c04570
 
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]