A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{PB}Broc05542 Insertion

General Information
Symbol Dmel\PBac{PB}Broc05542 Species D. melanogaster
Name FlyBase ID FBti0041232
Feature type transposable_element_insertion_site
Description
Inserted element PBac{PB} Expression data
Affected gene(s) Bro Viability / fertility
Causes allele(s) Broc05542 Stock availability 2 publicly available
LINE ID c05542
Genomic Location
Chromosomal location 3L ( 62A9 ) Sequence location 3L:1,648,573..1,648,573 [-]
Map ( GBrowse ) detailed view FBti0115545 FBti0104309 FBti0021560 FBti0038886 FBti0115466 FBti0040235 FBti0037674 FBti0050349 FBti0065945 FBti0041232 FBti0099730 FBti0065268 FBti0043597 FBti0115584 FBti0115516 FBti0054597 FBti0112091 FBti0072437 FBti0039238 FBti0104459 FBti0011341 FBti0112675 FBti0057341
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Description
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FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
Orientation
Cytological location
(computed by FlyBase)
62A9 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
62A9 (reported as inferred from sequence location)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct PBac{PB}
Location-dependent
role
deletion generation component
carries FRT site(s)
Size 7.257Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
Harvard
hide Linkouts
hide Comments
Location 3L:1632105-1632106 confirmed by FlyBase alignment of dbGSS accession CZ470080 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{PB}Broc05542
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]