A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\PBac{PB}Ugt58Fac05973 Insertion

General Information
Symbol Dmel\PBac{PB}Ugt58Fac05973 Species D. melanogaster
Name FlyBase ID FBti0041262
Feature type transposable_element_insertion_site
Description
Inserted element PBac{PB} Expression data
Affected gene(s) Ugt58Fa Viability / fertility
Causes allele(s) Ugt58Fac05973 Stock availability 2 publicly available
LINE ID c05973
Genomic Location
Chromosomal location 2R ( 58F3 ) Sequence location 2R:18,531,351..18,531,351 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0060861 FBti0125373_1 FBti0125373_2 FBti0042466 FBti0033873 FBti0107973 FBti0113078 FBti0113064 FBti0113069 FBti0026146 FBti0125374 FBti0045847 FBti0066187 FBti0024133 FBti0125375_1 FBti0125375_2 FBti0025733 FBti0042589 FBti0052013 FBti0047995 FBti0065147 FBti0045553 FBti0041262 FBti0067228 FBti0107499 FBti0011013 FBti0021436 FBti0107687 FBti0011211 FBti0040154 FBti0075823 FBti0131600 FBti0078398
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the Tni\piggyBac-based construct PBac{PB}. The PBac{PB} construct carries the w[+mC] mini-white marker flanked by short (48-bp) Scer\FRT recombination sites.
PBac{PB} insertion lines from Exelixis were remapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
(Thibault et al., 2004, Bellen et al., 2011)
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
2R
(Thibault, 2004, Thibault, 2004)
Sequence Location
2R:18,531,351..18,531,351 [-]
(Gene Disruption Project members and Exelixis, 2005)
Orientation
-
(Thibault, 2004, Thibault, 2004)
Cytological location
(computed by FlyBase)
58F3 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
58F3 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
CZ470397
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct PBac{PB}
Location-dependent
role
deletion generation component
(Thibault et al., 2004)
carries FRT site(s)
(Thibault et al., 2004)
Size 7.257Kb
Associated alleles
w+mPB.FRT
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ugt58Fa
(Gene Disruption Project members, 2001-)
hide Alleles and Phenotypes
Causes alleles
Ugt58Fac05973
(Bloomington Drosophila Stock Center, 2004.11.6)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
c05973
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
17739
w1118; PBac{PB}Ugt58Fac05973/CyO
Harvard
-
PBac{PB}Ugt58Fac05973
hide Linkouts
hide Comments
Location 2R:18151428-18151429 confirmed by FlyBase alignment of dbGSS accession CZ470397 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{PB}c05973
(Thibault, 2004, Thibault, 2004, FlyBase, 1992-)
PBac{PB}Ugt58Fac05973
(FlyBase, 2005, FlyBase, 1992-, )
Secondary FlyBase IDs
hide References ( 11 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nat. Genet. 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. (Computer file)
Genomic mapping of Exelixis insertion collection. (Computer file) [FBrf0184340]
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}.
Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}. [FBrf0221061]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]