A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{RB}CG30502e00486 Insertion

General Information
Symbol Dmel\PBac{RB}CG30502e00486 Species D. melanogaster
Name FlyBase ID FBti0041404
Feature type transposable_element_insertion_site
Description
Inserted element PBac{RB} Expression data
Affected gene(s) CG30502 Viability / fertility
Causes allele(s) CG30502e00486 Stock availability 2 publicly available
LINE ID e00486
Genomic Location
Chromosomal location 2R ( 43C1 ) Sequence location 2R:3,334,915..3,334,915 [+]
Map ( GBrowse ) detailed view FBti0018927 FBti0061113 FBti0061114 FBti0116096 FBti0036475 FBti0042011 FBti0046712 FBti0043155 FBti0116165_1 FBti0116165_2 FBti0041404 FBti0114862 FBti0067039 FBti0046095 FBti0048028 FBti0049599 FBti0067360 FBti0045517 FBti0048060 FBti0066022 FBti0035862 FBti0106589
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Description
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
Orientation
Cytological location
(computed by FlyBase)
43C1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
43C3 (reported as inferred from sequence location)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct PBac{RB}
Location-dependent
role
deletion generation component
carries FRT site(s)
Size 5.971Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
Harvard
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hide Comments
Location 2R:2959223-2959224 confirmed by FlyBase alignment of dbGSS accession CZ478369 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
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Reported As
Symbol Synonym
PBac{RB}CG30502e00486
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Christensen and Cook, 2007.3.22, Isolation and characterization of Df(2R)BSC2637.
Isolation and characterization of Df(2R)BSC2637. [FBrf0198995]
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]