A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{RB}CG13531e01893 Insertion

General Information
Symbol Dmel\PBac{RB}CG13531e01893 Species D. melanogaster
Name FlyBase ID FBti0041548
Feature type transposable_element_insertion_site
Description
Inserted element PBac{RB} Expression data
Affected gene(s) CG13531 Viability / fertility
Causes allele(s) CG13531e01893 Stock availability 2 publicly available
LINE ID e01893
Genomic Location
Chromosomal location 2R ( 59B3 ) Sequence location 2R:18,741,702..18,741,702
Map ( GBrowse ) detailed view FBti0018962 FBti0144091 FBti0125377_1 FBti0125377_2 FBti0041548 FBti0026423
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
2R
(Thibault, 2004, Thibault, 2004)
Sequence Location
2R:18,741,702..18,741,702
(Christensen et al., 2008.9.3)
Orientation
+
(Thibault, 2004, Thibault, 2004)
Cytological location
(computed by FlyBase)
59B3 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
59B3 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
Exelixis, Inc. determined the insertion site of PBac{RB}CG13531e01893 to be Release 3 genomic coordinate 17897747 on chromosome arm 2R.
(Christensen et al., 2008.9.3)
hide Sequence Data
Flanking sequence
CZ479708
(Gene Disruption Project members, 2001-)
CZ479709
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct PBac{RB}
Location-dependent
role
deletion generation component
(Thibault et al., 2004)
carries FRT site(s)
(Thibault et al., 2004)
Size 5.971Kb
Associated alleles
Rbp1SA.RB
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG13531
(Bloomington Drosophila Stock Center, 2004.11.6)
hide Alleles and Phenotypes
Causes alleles
CG13531e01893
(Bloomington Drosophila Stock Center, 2004.11.6)
Lethality
References
viable
(Bloomington Drosophila Stock Center, 2004.11.6)
Sterility
References
fertile
(Bloomington Drosophila Stock Center, 2004.11.6)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
e01893
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
17998
w1118; PBac{RB}CG13531e01893
Harvard
-
PBac{RB}CG13531e01893
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{RB}CG13531e01893
(Thibault, 2004, FlyBase, 1992-, Christensen et al., 2008.9.3)
PBac{RB}e01893
(Thibault, 2004, Thibault, 2004, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 8 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Personal communication to FlyBase
Christensen et al., 2008.9.3, Isolation and characterization of Df(2R)BSC599.
Isolation and characterization of Df(2R)BSC599. [FBrf0205643]
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]