A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{RB}CG3609e02299 Insertion

General Information
Symbol Dmel\PBac{RB}CG3609e02299 Species D. melanogaster
Name FlyBase ID FBti0041588
Feature type transposable_element_insertion_site
Description
Inserted element PBac{RB} Expression data
Affected gene(s) CG3609 Viability / fertility
Causes allele(s) CG3609e02299 Stock availability 3 publicly available
LINE ID e02299
Genomic Location
Chromosomal location 2L ( 22E1 ) Sequence location 2L:2,374,023..2,374,023 [+]
Map ( GBrowse ) detailed view FBti0021187 FBti0026184 FBti0034036 FBti0110486 FBti0057214 FBti0040122 FBti0076938 FBti0112155 FBti0006638 FBti0005163 FBti0109008 FBti0066859 FBti0109966 FBti0027596 FBti0102245 FBti0124517 FBti0046835 FBti0041588 FBti0046834 FBti0067090 FBti0066828 FBti0124518 FBti0041574 FBti0115467 FBti0052888 FBti0067430 FBti0025713 FBti0023381 FBti0124519_1 FBti0124519_2 FBti0111612 FBti0026348 FBti0045070 FBti0124520 FBti0017582
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Description
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
2L
(Thibault, 2004, Thibault, 2004)
Sequence Location
2L:2,374,023..2,374,023 [+]
(Gene Disruption Project members and Exelixis, 2005)
Orientation
+
(Thibault, 2004, Thibault, 2004)
Cytological location
(computed by FlyBase)
22E1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
22E1 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
CZ480127
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct PBac{RB}
Location-dependent
role
deletion generation component
(Thibault et al., 2004)
carries FRT site(s)
(Thibault et al., 2004)
Size 5.971Kb
Associated alleles
Rbp1SA.RB
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG3609
(Gene Disruption Project members, 2001-)
hide Alleles and Phenotypes
Causes alleles
CG3609e02299
(Bloomington Drosophila Stock Center, 2004.11.6)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
e02299
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 3 )
Bloomington
18037
w1118; PBac{RB}CG3609e02299/CyO
Harvard
-
PBac{RB}CG3609e02299
Kyoto
114500
yd2 w1118 P{ey-FLP.N}2; PBac{RB}CG3609e02299 P{neoFRT}40A/CyO y+
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hide Comments
Location 2L:2374022-2374023 refined by FlyBase alignment of dbGSS accession CZ480127 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{RB}CG3609e02299
(FlyBase, 2005, FlyBase, 1992-)
PBac{RB}e02299
(Thibault, 2004, Thibault, 2004, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Christensen et al., 2008.4.15, Isolation and characterization of Df(2L)BSC455.
Isolation and characterization of Df(2L)BSC455. [FBrf0204488]
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]