A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{RB}CG17219e03045 Insertion

General Information
Symbol Dmel\PBac{RB}CG17219e03045 Species D. melanogaster
Name FlyBase ID FBti0041664
Feature type transposable_element_insertion_site
Description
Inserted element PBac{RB} Expression data
Affected gene(s) CG17219 Viability / fertility
Causes allele(s) CG17219e03045 Stock availability 3 publicly available
LINE ID e03045
Genomic Location
Chromosomal location 2L ( 23C4 ) Sequence location 2L:3,029,684..3,029,684 [-]
Map ( GBrowse ) detailed view FBti0124534 FBti0011121 FBti0024088 FBti0010845 FBti0102167 FBti0007698 FBti0113456 FBti0106517 FBti0059355 FBti0026018 FBti0007678 FBti0115144 FBti0043862 FBti0041664 FBti0066439 FBti0046001 FBti0124535_2 FBti0124535_1 FBti0025819 FBti0018662 FBti0103097 FBti0104984
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
2L
(Thibault, 2004, Thibault, 2004)
Sequence Location
2L:3,029,684..3,029,684 [-]
(Gene Disruption Project members and Exelixis, 2005)
Orientation
-
(Thibault, 2004, Thibault, 2004)
Cytological location
(computed by FlyBase)
23C4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
23C5 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
CZ480813
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct PBac{RB}
Location-dependent
role
deletion generation component
(Thibault et al., 2004)
carries FRT site(s)
(Thibault et al., 2004)
Size 5.971Kb
Associated alleles
Rbp1SA.RB
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG17219
(Gene Disruption Project members, 2001-)
hide Alleles and Phenotypes
Causes alleles
CG17219e03045
(Bloomington Drosophila Stock Center, 2004.11.6, Gene Disruption Project members and Exelixis, 2005)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
e03045
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 3 )
Bloomington
18110
w1118; PBac{RB}CG17219e03045/CyO
Harvard
-
PBac{RB}CG17219e03045
Kyoto
114510
yd2 w1118 P{ey-FLP.N}2; PBac{RB}CG17219e03045 P{neoFRT}40A/CyO y+
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hide Comments
Location 2L:3029684-3029685 confirmed by FlyBase alignment of dbGSS accession CZ480813 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{RB}CG3605e03045
(Bloomington Drosophila Stock Center, 2004.11.6, FlyBase, 1992-)
PBac{RB}CG17219e03045
(FlyBase, 2005, FlyBase, 1992-)
PBac{RB}e03045
(Thibault, 2004, Thibault, 2004, FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Christensen and Cook, 2007.3.22, Isolation and characterization of Df(2L)BSC232.
Isolation and characterization of Df(2L)BSC232. [FBrf0199240]
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]