A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{RB}CG3662e04640 Insertion

General Information
Symbol Dmel\PBac{RB}CG3662e04640 Species D. melanogaster
Name FlyBase ID FBti0041847
Feature type transposable_element_insertion_site
Description
Inserted element PBac{RB} Expression data
Affected gene(s) CG3662 Viability / fertility
Causes allele(s) CG3662e04640 Stock availability 2 publicly available
LINE ID e04640
Genomic Location
Chromosomal location 2L ( 21E2 ) Sequence location 2L:824,180..824,180 [+]
Map ( GBrowse ) detailed view FBti0039265 FBti0049864 FBti0124487_2 FBti0124487_1 FBti0115138 FBti0112604 FBti0041847 FBti0124488 FBti0039047 FBti0108484 FBti0039883 FBti0058915 FBti0124489_2 FBti0124489_1 FBti0110380 FBti0075048 FBti0056961 FBti0005277_1 FBti0005277_2 FBti0111141 FBti0003950 FBti0025988 FBti0109394 FBti0010754 FBti0112227 FBti0029510
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Description
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
Orientation
Cytological location
(computed by FlyBase)
21E2 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
21D3 (reported as inferred from sequence location)
Comments concerning
location
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Flanking sequence
hide Inserted Element
Construct PBac{RB}
Location-dependent
role
deletion generation component
carries FRT site(s)
Size 5.971Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
Harvard
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hide Comments
Location 2L:824179-824180 refined by FlyBase alignment of dbGSS accession CZ482409 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
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Reported As
Symbol Synonym
PBac{RB}CG3662e04640
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]