A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{WH}CG9249f00877 Insertion

General Information
Symbol Dmel\PBac{WH}CG9249f00877 Species D. melanogaster
Name FlyBase ID FBti0041950
Feature type transposable_element_insertion_site
Description
Inserted element PBac{WH} Expression data
Affected gene(s) CG9249 Viability / fertility
Causes allele(s) CG9249f00877 Stock availability 2 publicly available
LINE ID f00877
Genomic Location
Chromosomal location 2L ( 39A6 ) Sequence location 2L:21,158,649..21,158,649 [+]
Map ( GBrowse ) detailed view FBti0019827 FBti0019828 FBti0025696 FBti0104531 FBti0048231 FBti0036517 FBti0023600 FBti0033508 FBti0054668 FBti0052393 FBti0040172 FBti0124899 FBti0049980 FBti0054460 FBti0044524 FBti0026288 FBti0111895 FBti0038690 FBti0051816 FBti0124900 FBti0039096 FBti0018471 FBti0008995 FBti0124901 FBti0025695 FBti0128143 FBti0041950 FBti0041942 FBti0050491 FBti0025712 FBti0039166 FBti0006703 FBti0016413 FBti0026428 FBti0124902_1 FBti0124902_2 FBti0108097 FBti0049529 FBti0047619 FBti0067071 FBti0006483 FBti0124903 FBti0021669
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Description
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
2L:21,158,649..21,158,649 [+]
Orientation
Cytological location
(computed by FlyBase)
39A6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
39A6 (reported as inferred from sequence location)
Comments concerning
location
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Flanking sequence
hide Inserted Element
Construct PBac{WH}
Location-dependent
role
deletion generation component
mobile activating element
carries FRT site(s)
Size 7.234Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
Harvard
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hide Comments
Location 2L:21146241-21146242 refined by FlyBase alignment of dbGSS accession CZ483353 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
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Reported As
Symbol Synonym
PBac{WH}CG9249f00877
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]