A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{WH}wrapperf02069 Insertion

General Information
Symbol Dmel\PBac{WH}wrapperf02069 Species D. melanogaster
Name FlyBase ID FBti0042079
Feature type transposable_element_insertion_site
Description
Inserted element PBac{WH} Expression data
Affected gene(s) wrapper Viability / fertility
Causes allele(s) wrapperf02069 Stock availability 2 publicly available
LINE ID f02069
Genomic Location
Chromosomal location 2R ( 58D4 ) Sequence location 2R:18,267,956..18,267,956
Map ( GBrowse ) detailed view FBti0051356 FBti0033003 FBti0056475 FBti0067664 FBti0046757 FBti0026182 FBti0116013 FBti0006563 FBti0042079 FBti0068756 FBti0112938 FBti0012554 FBti0004116 FBti0028848 FBti0006449 FBti0053970 FBti0033017 FBti0046848 FBti0048774 FBti0113537
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
2R
(Thibault, 2004, Thibault, 2004)
Sequence Location
2R:18,267,956..18,267,956
(Cook and Matthews, 2009.12.17)
Orientation
+
(Thibault, 2004, Thibault, 2004)
Cytological location
(computed by FlyBase)
58D4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
58D4 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
58D4 (reported as inferred from sequence location)
(Parks et al., 2004)
Comments concerning
location
The genomic location of PBac{WH}wrapper[f02069] was stated as 2R:18,731,988 through to FB2010_05, based on data given in FBrf0184340. This location is wrong, and the location was corrected to 2R:18,267,956 in FB2010_06.
(Cook and Matthews, 2009.12.17)
hide Sequence Data
Flanking sequence
CZ484566
(Gene Disruption Project members, 2001-)
CZ484567
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct PBac{WH}
Location-dependent
role
deletion generation component
(Thibault et al., 2004)
mobile activating element
(Thibault et al., 2004)
carries FRT site(s)
(Thibault et al., 2004)
Size 7.234Kb
Associated alleles
gypsy\su(Hw)BR348
Scer\UAS14x.hs.XP.Scer\FRT
Scer\UAS14x.hs.XP
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
wrapper
(Bloomington Drosophila Stock Center, 2004.11.6)
hide Alleles and Phenotypes
Causes alleles
wrapperf02069
(Bloomington Drosophila Stock Center, 2004.11.6)
Lethality
References
viable
(Bloomington Drosophila Stock Center, 2004.11.6)
Sterility
References
fertile
(Bloomington Drosophila Stock Center, 2004.11.6)
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
f02069
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
18511
w1118; PBac{WH}wrapperf02069
Harvard
-
PBac{WH}wrapperf02069
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
f02069
(Cook and Matthews, 2009.12.17)
PBac{WH}f02069
(Thibault, 2004, Thibault, 2004, Parks et al., 2004, FlyBase, 1992-)
PBac{WH}wrapperf02069
(Thibault, 2004, FlyBase, 1992-, Cook and Matthews, 2009.12.17)
Secondary FlyBase IDs
hide References ( 11 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Parks et al., 2004, Nature Genetics 36(3): 288--292
Systematic generation of high-resolution deletion coverage of the Drosophila melanogaster genome. [FBrf0175003]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Parks et al., 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174230]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Cook and Matthews, 2009.12.17, PBac{WH}wrapper[f02069] genomic coordinate.
PBac{WH}wrapper[f02069] genomic coordinate. [FBrf0210862]
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]