A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{WH}CG5290f02563 Insertion

General Information
Symbol Dmel\PBac{WH}CG5290f02563 Species D. melanogaster
Name FlyBase ID FBti0042136
Feature type transposable_element_insertion_site
Description
Inserted element PBac{WH} Expression data
Affected gene(s) CG5290 Viability / fertility
Causes allele(s) CG5290f02563 Stock availability 2 publicly available
LINE ID f02563
Genomic Location
Chromosomal location 3L ( 75A8 ) Sequence location 3L:17,903,068..17,903,068 [+]
Map ( GBrowse ) detailed view FBti0062625 FBti0020144 FBti0145208 FBti0124433 FBti0043511 FBti0028841 FBti0110294 FBti0072721 FBti0111684 FBti0102803 FBti0105351 FBti0113254 FBti0021913 FBti0066207 FBti0045683 FBti0042136 FBti0065024 FBti0125773_2 FBti0125773_1 FBti0044972 FBti0070915 FBti0044552 FBti0065881 FBti0067323
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Description
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
3L:17,903,068..17,903,068 [+]
Orientation
Cytological location
(computed by FlyBase)
75A8 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
75A9 (reported as inferred from sequence location)
Comments concerning
location
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Flanking sequence
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Construct PBac{WH}
Location-dependent
role
deletion generation component
mobile activating element
carries FRT site(s)
Size 7.234Kb
Associated alleles
Molecular map
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Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
Origin as a multiple insertion line
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Aberration
Balancer
hide Stocks ( 2 )
Bloomington
Harvard
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hide Comments
Location 3L:17875226-17875227 determined by FlyBase alignment of dbGSS accession CZ485091 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
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Reported As
Symbol Synonym
PBac{WH}CG5290f02563
Secondary FlyBase IDs
hide References ( 8 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]