A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\PBac{WH}Tkf06233 Insertion

General Information
Symbol Dmel\PBac{WH}Tkf06233 Species D. melanogaster
Name FlyBase ID FBti0042538
Feature type transposable_element_insertion_site
Description
Inserted element PBac{WH} Expression data
Affected gene(s) Ect3, Tk Viability / fertility
Causes allele(s) Ect3f06233, Tkf06233 Stock availability 2 publicly available
LINE ID f06233
Genomic Location
Chromosomal location 3R ( 87A4 ) Sequence location 3R:7,826,614..7,826,637 [-]
Map ( GBrowse ) detailed view FBti0046091 FBti0103201 FBti0068860 FBti0128306 FBti0056603 FBti0018668 FBti0054964 FBti0126548 FBti0043631 FBti0075866 FBti0051465 FBti0070667 FBti0107370 FBti0042538 FBti0143065 FBti0055992 FBti0024568 FBti0057736 FBti0112244 FBti0057671 FBti0049690 FBti0011495 FBti0039160 FBti0103633 FBti0047876
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Description
What does this section display?
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
3R
(Thibault, 2004, Thibault, 2004)
Sequence Location
3R:7,826,614..7,826,637 [-]
(Gene Disruption Project members and Exelixis, 2005)
Orientation
-
(Thibault, 2004, Thibault, 2004)
Cytological location
(computed by FlyBase)
87A4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
87A4 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
CZ488895
(Gene Disruption Project members, 2001-)
CZ488896
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct PBac{WH}
Location-dependent
role
deletion generation component
(Thibault et al., 2004)
mobile activating element
(Thibault et al., 2004)
carries FRT site(s)
(Thibault et al., 2004)
Size 7.234Kb
Associated alleles
gypsy\su(Hw)BR348
Scer\UAS14x.hs.XP.Scer\FRT
Scer\UAS14x.hs.XP
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ect3
(Gene Disruption Project members, 2001-)
Tk
(Gene Disruption Project members, 2001-)
hide Alleles and Phenotypes
Causes alleles
Ect3f06233
(Gene Disruption Project members and Exelixis, 2005)
Tkf06233
(Bloomington Drosophila Stock Center, 2004.11.6, Gene Disruption Project members and Exelixis, 2005)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
f06233
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
18951
w1118; PBac{WH}Tkf06233 Ect3f06233/TM6B, Tb+
Harvard
-
PBac{WH}Tkf06233
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{WH}Ect3f06233
(FlyBase, 1992-)
PBac{WH}f06233
(Thibault, 2004, Thibault, 2004, FlyBase, 1992-)
PBac{WH}Tkf06233
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 8 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nature Genetics 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]