A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{XP}CG14017d05326 Insertion

General Information
Symbol Dmel\P{XP}CG14017d05326 Species D. melanogaster
Name FlyBase ID FBti0042827
Feature type transposable_element_insertion_site
Description
Inserted element P{XP} Expression data
Affected gene(s) CG14017 Viability / fertility
Causes allele(s) CG14017d05326 Stock availability 2 publicly available
LINE ID d05326
Genomic Location
Chromosomal location 2L ( 25E6 ) Sequence location 2L:5,555,049..5,555,049 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0067028 FBti0055502 FBti0027090 FBti0047211 FBti0126461 FBti0051734 FBti0124585 FBti0041350 FBti0114184 FBti0145284 FBti0017652 FBti0042827 FBti0075407 FBti0124586_2 FBti0124586_1 FBti0145385 FBti0145386 FBti0101737 FBti0151942
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{XP}. The P{XP} construct carries the w[+mC] mini-white marker, long (199-bp) Scer\FRT sites, and is designed to allow flexible use of Scer\UAS sites for Scer\GAL4-driven misexpression of adjacent genes. FRT sites allow Scer\FLP-mediated recombination between other FRT-containing elements, and thus can be used to generate molecularly defined deletions.
P{XP} insertion lines from Exelixis were remapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
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Description
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
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Chromosome (arm)
Sequence Location
Orientation
Cytological location
(computed by FlyBase)
25E6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
25E6 (reported as inferred from sequence location)
25E6 (reported as inferred from sequence location)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{XP}
Location-dependent
role
deletion generation component
mobile activating element
carries FRT site(s)
Size 7.303Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 2 )
Bloomington
Harvard
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hide Comments
Location 2L:5555048-5555049 refined by FlyBase alignment of dbGSS accessions CZ474461 and CZ474460 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
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Reported As
Symbol Synonym
P{XP}CG14017d05326
Secondary FlyBase IDs
hide References ( 13 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Parks et al., 2004, Nat. Genet. 36(3): 288--292
Systematic generation of high-resolution deletion coverage of the Drosophila melanogaster genome. [FBrf0175003]
Thibault et al., 2004, Nat. Genet. 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Parks et al., 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174230]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 2. [FBrf0174227]
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. (Computer file)
Genomic mapping of Exelixis insertion collection. (Computer file) [FBrf0184340]
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}.
Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}. [FBrf0221061]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 2005, Assessment of transgenic construct insertion sites within genes.
Assessment of transgenic construct insertion sites within genes. [FBrf0184341]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]