A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\PBac{PB}c02888 Insertion

General Information
Symbol Dmel\PBac{PB}c02888 Species D. melanogaster
Name FlyBase ID FBti0044322
Feature type transposable_element_insertion_site
Description
Inserted element PBac{PB} Expression data
Affected gene(s) Viability / fertility
Causes allele(s) Stock availability 1 publicly available
LINE ID c02888
Genomic Location
Chromosomal location 2L ( 25B5 ) Sequence location 2L:4,965,649..4,965,878 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0019124 FBti0147307 FBti0065832 FBti0042673 FBti0044322 FBti0105423 FBti0023542 FBti0111610 FBti0025841 FBti0102335 FBti0025812 FBti0039233 FBti0124571 FBti0005297 FBti0025011 FBti0115563 FBti0129295 FBti0046731
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the Tni\piggyBac-based construct PBac{PB}. The PBac{PB} construct carries the w[+mC] mini-white marker flanked by short (48-bp) Scer\FRT recombination sites.
PBac{PB} insertion lines from Exelixis were remapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
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Description
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
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Chromosome (arm)
Sequence Location
Orientation
Cytological location
(computed by FlyBase)
25B5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
25B5 (reported as inferred from sequence location)
Comments concerning
location
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Flanking sequence
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Construct PBac{PB}
Location-dependent
role
deletion generation component
carries FRT site(s)
Size 7.257Kb
Associated alleles
Molecular map
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Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
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Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Harvard
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hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{PB}c02888
PBac{PB}CG31652c02888
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nat. Genet. 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. (Computer file)
Genomic mapping of Exelixis insertion collection. (Computer file) [FBrf0184340]
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}.
Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}. [FBrf0221061]
FlyBase Genome Annotators, 2006, Changes affecting gene model number or type in release 5.1 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 5.1 of the annotated D.melanogaster genome. [FBrf0191550]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]