A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{XP}Inx7d02117 Insertion

General Information
Symbol Dmel\P{XP}Inx7d02117 Species D. melanogaster
Name FlyBase ID FBti0054742
Feature type transposable_element_insertion_site
Description
Inserted element P{XP} Expression data
Affected gene(s) Inx7 Viability / fertility
Causes allele(s) Inx7d02117 Stock availability 1 publicly available
LINE ID d02117
Genomic Location
Chromosomal location X ( 6E4 ) Sequence location X:6,891,423..6,891,423 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0056573 FBti0035280 FBti0054275 FBti0036271 FBti0068477 FBti0054742 FBti0047255 FBti0036293 FBti0035761 FBti0049155 FBti0035520 FBti0037242 FBti0071934 FBti0007550 FBti0070644 FBti0146130 FBti0104812 FBti0104813 FBti0013959 FBti0013327 FBti0099905 FBti0038221 FBti0028235 FBti0029875 FBti0146102 FBti0007475 FBti0111102 FBti0069126 FBti0021149 FBti0033752 FBti0030208 FBti0055081 FBti0037254 FBti0069797 FBti0037261 FBti0069069 FBti0013214 FBti0013223 FBti0013966 FBti0018563 FBti0038224 FBti0036765 FBti0012809 FBti0012827 FBti0012837 FBti0013132 FBti0015526 FBti0038223 FBti0071949 FBti0012841 FBti0038222 FBti0036284 FBti0039035 FBti0065966 FBti0047696
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{XP}. The P{XP} construct carries the w[+mC] mini-white marker, long (199-bp) Scer\FRT sites, and is designed to allow flexible use of Scer\UAS sites for Scer\GAL4-driven misexpression of adjacent genes. FRT sites allow Scer\FLP-mediated recombination between other FRT-containing elements, and thus can be used to generate molecularly defined deletions.
P{XP} insertion lines from Exelixis were remapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
(Thibault et al., 2004, Bellen et al., 2011)
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
X
(Thibault, 2004)
Sequence Location
X:6,891,423..6,891,423 [+]
(Gene Disruption Project members and Exelixis, 2005)
Orientation
+
(Thibault, 2004)
Cytological location
(computed by FlyBase)
6E4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
6E4 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
CZ472627
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct P{XP}
Location-dependent
role
deletion generation component
(Thibault et al., 2004)
mobile activating element
(Thibault et al., 2004)
carries FRT site(s)
(Thibault et al., 2004)
Size 7.303Kb
Associated alleles
gypsy\su(Hw)BR348
Scer\UAS14x.hs.XP.Scer\FRT
Scer\UAS14x.hs.XP
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Inx7
(FlyBase Curators, 2008)
hide Alleles and Phenotypes
Causes alleles
Inx7d02117
(FlyBase Curators, 2008)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
d02117
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Harvard
-
P{XP}Inx7d02117
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{XP}d02117
(Thibault, 2004, FlyBase, 1992-)
P{XP}inx7d02117
 
P{XP}Inx7d02117
 
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nat. Genet. 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. (Computer file)
Genomic mapping of Exelixis insertion collection. (Computer file) [FBrf0184340]
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}.
Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}. [FBrf0221061]
FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations.
Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]