A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\PBac{PBss}scafPBss Insertion

General Information
Symbol Dmel\PBac{PBss}scafPBss Species D. melanogaster
Name FlyBase ID FBti0058724
Feature type transposable_element_insertion_site
Description
Inserted element PBac{PBss} Expression data
Affected gene(s) scaf Viability / fertility
Causes allele(s) scafPBss Stock availability none publicly available
LINE ID
Genomic Location
Chromosomal location 2R ( 41F7 ) Sequence location 2R:1,569,429..1,569,432 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0063143 FBti0063144 FBti0063759 FBti0063149 FBti0037907 FBti0051063 FBti0067856 FBti0145282 FBti0021918 FBti0058724 FBti0049887 FBti0044976
Member of Large Scale Dataset(s)
Dataset
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:1,569,429..1,569,432 [-]
(Bonin and Mann, 2004)
Orientation
Cytological location
(computed by FlyBase)
41F7 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
41F8 (reported as inferred from sequence location)
(Bonin and Mann, 2004)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct PBac{PBss}
Location-dependent
role
GFP gene trap
(Bonin and Mann, 2004)
Size
Associated alleles
Avic\GFPPBss
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
scaf
(Bonin and Mann, 2004, Rousset et al., 2010, Bonin and Mann, 2004)
hide Alleles and Phenotypes
Causes alleles
scafPBss
(Bonin and Mann, 2004, Rousset et al., 2010)
Lethality
References
lethal | pupal stage | recessive
(Bonin and Mann, 2004)
partially lethal - majority die | recessive
(Rousset et al., 2010)
Sterility
References
hide Phenotype Manifest In
adult head
(Bonin and Mann, 2004, Rousset et al., 2010)
hide Detailed Description
Statement
Reference
Expression of scaf[Scer\UAS.cRa] driven by Scer\GAL4[Act5C.PI] partially rescues the lethality of homozygousscaf[PBss] mutants.
(Rousset et al., 2010)
Homozygous scaf[PBss] escapers exhibit a head scar under the proboscis.
(Rousset et al., 2010)
Homozygous adult escapers have what appears to be "scarring" around the mouthparts that is indicative of necrotic tissue.
(Bonin and Mann, 2004)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
hide Linkouts
hide Comments
4pb insertion associated host repeat
(Bonin and Mann, 2004)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{PBss}scafPBss
 
PBac{PBss}scarfacePBss
(FlyBase, 1992-, Bonin and Mann, 2004)
Secondary FlyBase IDs
hide References ( 3 )
Research paper
Rousset et al., 2010, Development 137(13): 2177--2186
The Drosophila serine protease homologue Scarface regulates JNK signalling in a negative-feedback loop during epithelial morphogenesis. [FBrf0211045]
Bonin and Mann, 2004, Genetics 167(4): 1801--1811
A piggyBac transposon gene trap for the analysis of gene expression and function in Drosophila. [FBrf0179794]
FlyBase analysis
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]