A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{XP}Hsrωd02763 Insertion

General Information
Symbol Dmel\P{XP}Hsrωd02763 Species D. melanogaster
Name FlyBase ID FBti0068775
Feature type transposable_element_insertion_site
Description
Inserted element P{XP} Expression data
Affected gene(s) Hsrω Viability / fertility
Causes allele(s) Hsrωd02763 Stock availability none publicly available
LINE ID d02763
Genomic Location
Chromosomal location 3R ( 93D4 ) Sequence location 3R:17,123,142..17,123,142 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0063825 FBti0037776 FBti0036546 FBti0045013 FBti0112488 FBti0107589 FBti0030106 FBti0107024 FBti0111285 FBti0100092 FBti0007966 FBti0011673 FBti0059399 FBti0029469 FBti0110535 FBti0027949 FBti0034586 FBti0018654 FBti0100849 FBti0007876 FBti0008029 FBti0011435 FBti0106143 FBti0059151 FBti0110956 FBti0108173 FBti0103292 FBti0010095 FBti0028302 FBti0028438 FBti0110095 FBti0112766 FBti0069671 FBti0033744 FBti0107727 FBti0055454 FBti0059231 FBti0108866 FBti0005054 FBti0005531 FBti0008036 FBti0104389 FBti0103666 FBti0011440 FBti0112635 FBti0029032 FBti0112297 FBti0058826 FBti0059420 FBti0103099 FBti0011441 FBti0108290 FBti0110414 FBti0110158 FBti0106209 FBti0114987 FBti0106585 FBti0072367 FBti0008038 FBti0109636 FBti0110154 FBti0107746 FBti0067011 FBti0068775 FBti0104517 FBti0106354 FBti0036576 FBti0035220 FBti0036082 FBti0126197_2 FBti0126197_1 FBti0075783 FBti0047347
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{XP}. The P{XP} construct carries the w[+mC] mini-white marker, long (199-bp) Scer\FRT sites, and is designed to allow flexible use of Scer\UAS sites for Scer\GAL4-driven misexpression of adjacent genes. FRT sites allow Scer\FLP-mediated recombination between other FRT-containing elements, and thus can be used to generate molecularly defined deletions.
P{XP} insertion lines from Exelixis were remapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3R:17,123,142..17,123,142 [+]
Orientation
Cytological location
(computed by FlyBase)
93D4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
93D4 (reported as inferred from sequence location)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{XP}
Location-dependent
role
deletion generation component
mobile activating element
carries FRT site(s)
Size 7.303Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
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hide Comments
Location 3R:17123142-17123143 confirmed by FlyBase alignment of dbGSS accession CZ472984 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{XP}d02763b
P{XP}Hsrωd02763
P{XP}Hsrωd02763b
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nat. Genet. 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Supplementary material
Thibault, 2004, Nature Genetics 36(3):
Supplementary Table 3. [FBrf0174228]
Personal communication to FlyBase
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. (Computer file)
Genomic mapping of Exelixis insertion collection. (Computer file) [FBrf0184340]
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}.
Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}. [FBrf0221061]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]