A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{XP}l(1)G0007d08448 Insertion

General Information
Symbol Dmel\P{XP}l(1)G0007d08448 Species D. melanogaster
Name FlyBase ID FBti0069961
Feature type transposable_element_insertion_site
Description
Inserted element P{XP} Expression data
Affected gene(s) l(1)G0007 Viability / fertility
Causes allele(s) l(1)G0007d08448 Stock availability none publicly available
LINE ID d08448
Genomic Location
Chromosomal location X ( 12E4 ) Sequence location X:14,106,404..14,106,405 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0048921 FBti0111131 FBti0035441 FBti0110675 FBti0013903 FBti0053512 FBti0148551 FBti0015680 FBti0025239 FBti0069839 FBti0054501 FBti0054604 FBti0028652 FBti0111152 FBti0012843 FBti0015681 FBti0015643 FBti0071892 FBti0038214 FBti0039397 FBti0012847 FBti0069961 FBti0048941 FBti0068262 FBti0067181 FBti0038770 FBti0045949 FBti0053758 FBti0056347 FBti0107693 FBti0036760 FBti0048903 FBti0147204 FBti0071291 FBti0071741 FBti0013211 FBti0015513 FBti0107576 FBti0106962 FBti0015631 FBti0028541 FBti0104308 FBti0007332 FBti0028552 FBti0020905 FBti0059352 FBti0111881 FBti0015668 FBti0007326 FBti0071959
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{XP}. The P{XP} construct carries the w[+mC] mini-white marker, long (199-bp) Scer\FRT sites, and is designed to allow flexible use of Scer\UAS sites for Scer\GAL4-driven misexpression of adjacent genes. FRT sites allow Scer\FLP-mediated recombination between other FRT-containing elements, and thus can be used to generate molecularly defined deletions.
P{XP} insertion lines from Exelixis were remapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
(Thibault et al., 2004, Bellen et al., 2011)
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Description
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
X:14,106,404..14,106,405 [+]
(Gene Disruption Project members and Exelixis, 2005)
Orientation
Cytological location
(computed by FlyBase)
12E4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
12E5 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
CZ476234
(Gene Disruption Project members, 2001-)
CZ476235
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct P{XP}
Location-dependent
role
deletion generation component
(Thibault et al., 2004)
mobile activating element
(Thibault et al., 2004)
carries FRT site(s)
(Thibault et al., 2004)
Size 7.303Kb
Associated alleles
gypsy\su(Hw)BR348
Scer\UAS14x.hs.XP.Scer\FRT
Scer\UAS14x.hs.XP
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
l(1)G0007
(Gene Disruption Project members, 2001-)
hide Alleles and Phenotypes
Causes alleles
l(1)G0007d08448
(Gene Disruption Project members and Exelixis, 2005)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
d08448
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{XP}d08448
(FlyBase, 1992-)
P{XP}l(1)G0007d08448
(FlyBase, 1992-, )
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nat. Genet. 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Personal communication to FlyBase
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. (Computer file)
Genomic mapping of Exelixis insertion collection. (Computer file) [FBrf0184340]
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}.
Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}. [FBrf0221061]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]