A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{XP}Ggt-1d08759 Insertion

General Information
Symbol Dmel\P{XP}Ggt-1d08759 Species D. melanogaster
Name FlyBase ID FBti0070024
Feature type transposable_element_insertion_site
Description
Inserted element P{XP} Expression data
Affected gene(s) Ggt-1 Viability / fertility
Causes allele(s) Ggt-1d08759 Stock availability none publicly available
LINE ID d08759
Genomic Location
Chromosomal location X ( 17C1 ) Sequence location X:18,401,128..18,401,128 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0057820 FBti0042979 FBti0048811 FBti0048479 FBti0051578 FBti0071777 FBti0108192 FBti0017169 FBti0111133 FBti0069150 FBti0107694 FBti0036748 FBti0068728 FBti0068696 FBti0054734 FBti0038198 FBti0026447 FBti0036314 FBti0077022 FBti0071820 FBti0112103 FBti0033850 FBti0029420 FBti0031869 FBti0021296 FBti0070024 FBti0054769 FBti0071737 FBti0033486 FBti0075994 FBti0056281 FBti0030072 FBti0055296 FBti0070003 FBti0067124 FBti0042521 FBti0013920 FBti0013193 FBti0033154 FBti0035527 FBti0107577 FBti0035071 FBti0035329 FBti0143607 FBti0071684 FBti0143568
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{XP}. The P{XP} construct carries the w[+mC] mini-white marker, long (199-bp) Scer\FRT sites, and is designed to allow flexible use of Scer\UAS sites for Scer\GAL4-driven misexpression of adjacent genes. FRT sites allow Scer\FLP-mediated recombination between other FRT-containing elements, and thus can be used to generate molecularly defined deletions.
P{XP} insertion lines from Exelixis were remapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
(Thibault et al., 2004, Bellen et al., 2011)
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
X:18,401,128..18,401,128 [+]
(Gene Disruption Project members and Exelixis, 2005)
Orientation
Cytological location
(computed by FlyBase)
17C1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
17C1 (reported as inferred from sequence location)
(Gene Disruption Project members, 2001-)
Comments concerning
location
hide Sequence Data
Flanking sequence
CZ476396
(Gene Disruption Project members, 2001-)
hide Inserted Element
Construct P{XP}
Location-dependent
role
deletion generation component
(Thibault et al., 2004)
mobile activating element
(Thibault et al., 2004)
carries FRT site(s)
(Thibault et al., 2004)
Size 7.303Kb
Associated alleles
gypsy\su(Hw)BR348
Scer\UAS14x.hs.XP.Scer\FRT
Scer\UAS14x.hs.XP
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Ggt-1
(Gene Disruption Project members, 2001-)
hide Alleles and Phenotypes
Causes alleles
Ggt-1d08759
(Gene Disruption Project members and Exelixis, 2005)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
d08759
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
hide Linkouts
hide Comments
Location X:18341032-18341033 confirmed by FlyBase alignment of dbGSS accession CZ476396 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{XP}CG6461d08759
(FlyBase, 1992-, FlyBase, 2005)
P{XP}d08759
(FlyBase, 1992-)
P{XP}Ggt-1d08759
 
Secondary FlyBase IDs
hide References ( 8 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Thibault et al., 2004, Nat. Genet. 36(3): 283--287
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. [FBrf0175002]
Personal communication to FlyBase
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. (Computer file)
Genomic mapping of Exelixis insertion collection. (Computer file) [FBrf0184340]
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}.
Members of Exelixis insertion collections: P{XP}, PBac{PB}, PBac{RB}, PBac{WH}. [FBrf0221061]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]