A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{wHy}fraDG25410 Insertion

General Information
Symbol Dmel\P{wHy}fraDG25410 Species D. melanogaster
Name FlyBase ID FBti0072193
Feature type transposable_element_insertion_site
Description
Inserted element P{wHy} Expression data
Affected gene(s) fra Viability / fertility
Causes allele(s) fraDG25410 Stock availability 1 publicly available
LINE ID DG25410
Genomic Location
Chromosomal location 2R ( 49B2 ) Sequence location 2R:8,422,219..8,422,258 [+]
Map ( GBrowse ) detailed view FBti0063034 FBti0047745 FBti0021254 FBti0021081 FBti0026421 FBti0107280 FBti0106057 FBti0059274 FBti0072193
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
2R:8,422,219..8,422,258 [+]
(Gelbart, 2008.3.31)
Orientation
Cytological location
(computed by FlyBase)
49B2 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
49B2 (reported as inferred from sequence location)
(Gelbart, 2008.3.31)
Comments concerning
location
hide Sequence Data
Flanking sequence
ET634676
(Gelbart, 2008.3.31)
ET634677
(Gelbart, 2008.3.31)
hide Inserted Element
Construct P{wHy}
Location-dependent
role
deletion generation component
(Huet et al., 2002)
carries hobo element
(Huet et al., 2002)
Size 15.588Kb
Associated alleles
w+mC
y+t7.7
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
fra
(Myrick et al., 2005.5.16, Gelbart, 2008.3.31)
hide Alleles and Phenotypes
Causes alleles
fraDG25410
(Myrick et al., 2005.5.16, Gelbart, 2008.3.31)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
DG25410
(Gelbart, 2008.3.31)
Origin as a multiple insertion line
P
(Gelbart, 2008.3.31)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
21280
y1 w67c23; P{wHy}fraDG25410
hide Linkouts
hide Comments
LINECOMMENT:Flanks map 40 bp apart, consistent with two inserts or one insert assocated with a rearrangement; the terminal nucleotide is missing at the 5prime end of the P element.
(Gelbart, 2008.3.31)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{wHy}fraDG25410
(Myrick et al., 2005.5.16, FlyBase, 1992-, Gelbart, 2008.3.31)
Secondary FlyBase IDs
hide References ( 5 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Huet et al., 2002, Proc. Natl. Acad. Sci. USA 99(15): 9948--9953
A deletion-generator compound element allows deletion saturation analysis for genomewide phenotypic annotation. [FBrf0151478]
Personal communication to FlyBase
Gelbart, 2008.3.31, DG.xml
DG.xml [FBrf0204101]
Myrick et al., 2005.5.16, Deletion Generator Project genomic insertion collection.
Deletion Generator Project genomic insertion collection. [FBrf0188490]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]