A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{wHy}GykDG05111 Insertion

General Information
Symbol Dmel\P{wHy}GykDG05111 Species D. melanogaster
Name FlyBase ID FBti0072374
Feature type transposable_element_insertion_site
Description
Inserted element P{wHy} Expression data
Affected gene(s) Gyk, NitFhit Viability / fertility
Causes allele(s) GykDG05111, NitFhitDG05111 Stock availability 1 publicly available
LINE ID DG05111
Genomic Location
Chromosomal location 3L ( 61B2 ) Sequence location 3L:203,683..203,683 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0125446 FBti0112112 FBti0110240 FBti0110255 FBti0038073 FBti0107068 FBti0046301 FBti0072374 FBti0076019 FBti0053345 FBti0104449 FBti0021626 FBti0125447_1 FBti0125447_2 FBti0057629 FBti0124432 FBti0055943 FBti0115661 FBti0110335 FBti0110394 FBti0112613 FBti0111125 FBti0021346
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{wHy}. The P{wHy} construct carries two visible markers, the mini-white marker w[+mC] and the yellow marker y[+t7.7], which flank a transposition-competent hobo element. It was designed as a deletion generation and detection system: exposure to the hobo transposase results local deletions and concomitant loss of one marker or the other.
Insertion lines from this collection were assessed for inclusion in the Gene Disruption Project collection; some lines were mapped by the GDP.
(Huet et al., 2002, Bellen et al., 2004)
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3L:203,683..203,683 [-]
(Gelbart, 2008.3.31)
Orientation
Cytological location
(computed by FlyBase)
61B2 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
61B2 (reported as inferred from sequence location)
(Gelbart, 2008.3.31)
Comments concerning
location
hide Sequence Data
Flanking sequence
ET634304
(Gelbart, 2008.3.31)
hide Inserted Element
Construct P{wHy}
Location-dependent
role
deletion generation component
(Huet et al., 2002)
carries hobo element
(Huet et al., 2002)
Size 15.588Kb
Associated alleles
w+mC
y+t7.7
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Gyk
(Myrick et al., 2005.5.16, Gelbart, 2008.3.31, Myrick et al., 2008.12.2)
NitFhit
(Myrick et al., 2008.12.2)
hide Alleles and Phenotypes
Causes alleles
GykDG05111
(Myrick et al., 2005.5.16, Gelbart, 2008.3.31, Myrick et al., 2008.12.2)
NitFhitDG05111
(Myrick et al., 2008.12.2)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
Homozygous flies show normal survival when raised on a glycerol only food source.
(Wightman et al., 2012)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
DG05111
(Gelbart, 2008.3.31)
Origin as a multiple insertion line
N
(Gelbart, 2008.3.31)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
21039
y1 w67c23; P{wHy}GykDG05111 NitFhitDG05111
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{wHy}GykDG05111
(Myrick et al., 2005.5.16, FlyBase, 1992-, Gelbart, 2008.3.31, )
Secondary FlyBase IDs
hide References ( 8 )
Research paper
Wightman et al., 2012, PLoS ONE 7(3): e31779
Glycerol hypersensitivity in a Drosophila model for glycerol kinase deficiency is affected by mutations in eye pigmentation genes. [FBrf0217823]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Huet et al., 2002, Proc. Natl. Acad. Sci. U.S.A. 99(15): 9948--9953
A deletion-generator compound element allows deletion saturation analysis for genomewide phenotypic annotation. [FBrf0151478]
Personal communication to FlyBase
Gelbart, 2008.3.31, DG.xml
DG.xml [FBrf0204101]
Myrick et al., 2008.12.2, Alignment of P{wHy} collection to current genome.
Alignment of P{wHy} collection to current genome. [FBrf0206273]
Myrick et al., 2005.5.16, Deletion Generator Project genomic insertion collection.
Deletion Generator Project genomic insertion collection. [FBrf0188490]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]