A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{wHy}Oatp30BDG10611 Insertion

General Information
Symbol Dmel\P{wHy}Oatp30BDG10611 Species D. melanogaster
Name FlyBase ID FBti0072472
Feature type transposable_element_insertion_site
Description
Inserted element P{wHy} Expression data
Affected gene(s) CG33298, Oatp30B Viability / fertility
Causes allele(s) Oatp30BDG10611 Stock availability none publicly available
LINE ID DG10611
Genomic Location
Chromosomal location 2L ( 30B10 ) Sequence location 2L:9,523,057..9,523,057 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0044178 FBti0106937 FBti0007724 FBti0113411 FBti0056876 FBti0021696 FBti0026189 FBti0070250 FBti0011307 FBti0057276 FBti0111196 FBti0053941 FBti0010765 FBti0035059 FBti0105063 FBti0106046 FBti0059484 FBti0072472 FBti0052014
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{wHy}. The P{wHy} construct carries two visible markers, the mini-white marker w[+mC] and the yellow marker y[+t7.7], which flank a transposition-competent hobo element. It was designed as a deletion generation and detection system: exposure to the hobo transposase results local deletions and concomitant loss of one marker or the other.
Insertion lines from this collection were assessed for inclusion in the Gene Disruption Project collection; some lines were mapped by the GDP.
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Description
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FB2013_03
FB2013_02
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Chromosome (arm)
Sequence Location
2L:9,523,057..9,523,057 [-]
Orientation
Cytological location
(computed by FlyBase)
30B10 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
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Flanking sequence
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Construct P{wHy}
Location-dependent
role
deletion generation component
carries hobo element
Size 15.588Kb
Associated alleles
Molecular map
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Insertion may
affect gene
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Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
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Line ID
DG10611
Origin as a multiple insertion line
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hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
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Reported As
Symbol Synonym
P{wHy}CG33298DG10611
P{wHy}Oatp30BDG10611
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Huet et al., 2002, Proc. Natl. Acad. Sci. U.S.A. 99(15): 9948--9953
A deletion-generator compound element allows deletion saturation analysis for genomewide phenotypic annotation. [FBrf0151478]
Personal communication to FlyBase
Myrick et al., 2008.12.2, Alignment of P{wHy} collection to current genome.
Alignment of P{wHy} collection to current genome. [FBrf0206273]
Myrick et al., 2005.5.16, Deletion Generator Project genomic insertion collection.
Deletion Generator Project genomic insertion collection. [FBrf0188490]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 2007.6, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0199566]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]