A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EPg}HP37274 Insertion

General Information
Symbol Dmel\P{EPg}HP37274 Species D. melanogaster
Name FlyBase ID FBti0074848
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) Viability / fertility
Causes allele(s) Stock availability 1 publicly available
LINE ID HP37274
Genomic Location
Chromosomal location 3L ( 61C8 ) Sequence location 3L:690,157..690,157 [+]
Map ( GBrowse ) detailed view FBti0011693 FBti0068399 FBti0103117 FBti0029740 FBti0039340 FBti0125456 FBti0047396 FBti0102942 FBti0112578 FBti0011735 FBti0035084 FBti0055899 FBti0027107 FBti0108265 FBti0011691 FBti0103567 FBti0113192 FBti0072719 FBti0103621 FBti0102782 FBti0067587 FBti0125457 FBti0066231 FBti0066612 FBti0048294 FBti0049327 FBti0049195 FBti0044105 FBti0067405 FBti0021939 FBti0039384 FBti0074848 FBti0076310 FBti0035992 FBti0112762 FBti0104418 FBti0037095 FBti0106223 FBti0039478 FBti0105571 FBti0103816 FBti0102845 FBti0110587 FBti0035538 FBti0107114 FBti0110857 FBti0037544 FBti0112784 FBti0035334 FBti0105411
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
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Chromosome (arm)
Sequence Location
3L:690,157..690,157 [+]
Orientation
Cytological location
(computed by FlyBase)
61C8 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
HP37274
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
HP37274
P{EPg}HP37274
Secondary FlyBase IDs
hide References ( 5 )
Research paper
Staudt et al., 2005, PLoS Gen. 1(4): 499--506
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]