A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EPg}HP36271 Insertion

General Information
Symbol Dmel\P{EPg}HP36271 Species D. melanogaster
Name FlyBase ID FBti0074896
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) Viability / fertility
Causes allele(s) Stock availability 1 publicly available
LINE ID HP36271
Genomic Location
Chromosomal location 3L ( 65D4 ) Sequence location 3L:6,949,041..6,949,041 [+]
Map ( GBrowse ) detailed view FBti0105053 FBti0074896 FBti0041149 FBti0044352 FBti0065390 FBti0125542_1 FBti0044316 FBti0125542_2 FBti0108108 FBti0011679_1 FBti0102314 FBti0011679_2 FBti0111351 FBti0035555 FBti0112980 FBti0056932 FBti0034564 FBti0029453 FBti0018152 FBti0005591 FBti0034377 FBti0033823 FBti0112841 FBti0105528 FBti0102233 FBti0103687 FBti0029390 FBti0006125 FBti0112571 FBti0106787 FBti0055010 FBti0107353 FBti0029606 FBti0029159 FBti0028956 FBti0029391 FBti0039928 FBti0036206 FBti0113416 FBti0108606 FBti0113336 FBti0113426 FBti0110383 FBti0037129 FBti0069264 FBti0110637 FBti0005520 FBti0105480 FBti0100194 FBti0106483 FBti0108011 FBti0069006 FBti0113244 FBti0110258 FBti0108536 FBti0072689 FBti0105637 FBti0036079
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3L:6,949,041..6,949,041 [+]
Orientation
Cytological location
(computed by FlyBase)
65D4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
HP36271
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
HP36271
P{EPg}HP36271
Secondary FlyBase IDs
hide References ( 5 )
Research paper
Staudt et al., 2005, PLoS Gen. 1(4): 499--506
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]