A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EPg}HP35866 Insertion

General Information
Symbol Dmel\P{EPg}HP35866 Species D. melanogaster
Name FlyBase ID FBti0074911
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) Viability / fertility
Causes allele(s) Stock availability 1 publicly available
LINE ID HP35866
Genomic Location
Chromosomal location 3L ( 71E1 ) Sequence location 3L:15,573,600..15,573,600 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0125715_2 FBti0125715_1 FBti0052241 FBti0076128 FBti0041657 FBti0112086 FBti0074911 FBti0007856 FBti0034922 FBti0102570 FBti0108607 FBti0027089 FBti0072442 FBti0011698 FBti0112329 FBti0046990 FBti0037837 FBti0036667 FBti0034926 FBti0034816 FBti0004988 FBti0017042 FBti0036607 FBti0107939 FBti0036674 FBti0105959 FBti0029902
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EPg}. The P{EPg} construct carries the mini-white marker w[+mC], and Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator (FBrf0128569). The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
Insertion lines from this collection were assessed for inclusion in the Gene Disruption Project collection.
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Description
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FB2013_03
FB2013_02
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Chromosome (arm)
Sequence Location
3L:15,573,600..15,573,600 [+]
Orientation
Cytological location
(computed by FlyBase)
71E1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
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Flanking sequence
hide Inserted Element
Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
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Line ID
HP35866
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
HP35866
P{EPg}HP35866
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Staudt et al., 2005, PLoS Genet. 1(4): e55
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]