A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EPg}HP35249 Insertion

General Information
Symbol Dmel\P{EPg}HP35249 Species D. melanogaster
Name FlyBase ID FBti0074935
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) Viability / fertility
Causes allele(s) Stock availability 1 publicly available
LINE ID HP35249
Genomic Location
Chromosomal location 3L ( 64E6 ) Sequence location 3L:5,758,621..5,758,621 [+]
Map ( GBrowse ) detailed view FBti0142997 FBti0044020 FBti0011437 FBti0125533_1 FBti0125533_2 FBti0074935 FBti0039475 FBti0029137 FBti0126684 FBti0115512 FBti0046469 FBti0023440 FBti0125534_2 FBti0125534_1 FBti0078003 FBti0046362 FBti0007995 FBti0103716 FBti0109508 FBti0056155 FBti0005455 FBti0108285 FBti0108296 FBti0143926 FBti0050175 FBti0143888
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
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Chromosome (arm)
Sequence Location
3L:5,758,621..5,758,621 [+]
Orientation
Cytological location
(computed by FlyBase)
64E6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
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Flanking sequence
hide Inserted Element
Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
HP35249
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
HP35249
P{EPg}HP35249
Secondary FlyBase IDs
hide References ( 5 )
Research paper
Staudt et al., 2005, PLoS Gen. 1(4): 499--506
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]