A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EPg}CG4169HP30793 Insertion

General Information
Symbol Dmel\P{EPg}CG4169HP30793 Species D. melanogaster
Name FlyBase ID FBti0075004
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) CG4169 Viability / fertility
Causes allele(s) CG4169HP30793 Stock availability 1 publicly available
LINE ID HP30793
Genomic Location
Chromosomal location 3L ( 73A10 ) Sequence location 3L:16,577,440..16,577,440 [-]
Map ( GBrowse ) detailed view FBti0061962 FBti0111858 FBti0039190 FBti0011768 FBti0052663 FBti0053597 FBti0049739 FBti0105901 FBti0042509 FBti0126730 FBti0057901 FBti0125737 FBti0070777 FBti0109192 FBti0125738_2 FBti0125738_1 FBti0072318 FBti0034658 FBti0125739 FBti0103184 FBti0075004 FBti0056049 FBti0113089 FBti0025111 FBti0005460 FBti0041534 FBti0066682 FBti0126582
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
3L:16,577,440..16,577,440 [-]
Orientation
Cytological location
(computed by FlyBase)
73A10 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
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Flanking sequence
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Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
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Insertion may
affect gene
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Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
HP30793
Origin as a multiple insertion line
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Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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Reported As
Symbol Synonym
HP30793
P{EPg}CG4169HP30793
 
P{EPg}HP30793
Secondary FlyBase IDs
hide References ( 5 )
Research paper
Staudt et al., 2005, PLoS Gen. 1(4): 499--506
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]