A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EPg}HP26250 Insertion

General Information
Symbol Dmel\P{EPg}HP26250 Species D. melanogaster
Name FlyBase ID FBti0075050
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) Viability / fertility
Causes allele(s) Stock availability 1 publicly available
LINE ID HP26250
Genomic Location
Chromosomal location 2R ( 55B12 ) Sequence location 2R:14,067,744..14,067,744 [+]
Map ( GBrowse ) detailed view FBti0114270 FBti0007682 FBti0025669 FBti0033619 FBti0105268 FBti0040185 FBti0107118 FBti0029630 FBti0110935 FBti0054002 FBti0034273 FBti0113147 FBti0109310 FBti0028321 FBti0107627 FBti0106828 FBti0037375 FBti0017158 FBti0106407 FBti0106406 FBti0125268 FBti0069103 FBti0046470 FBti0042256 FBti0111016 FBti0075108 FBti0066082 FBti0124441 FBti0075050 FBti0115566 FBti0029869 FBti0024750 FBti0027217 FBti0106863 FBti0104706 FBti0030283 FBti0042426
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
2R:14,067,744..14,067,744 [+]
Orientation
Cytological location
(computed by FlyBase)
55B12 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
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Flanking sequence
hide Inserted Element
Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
HP26250
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
HP26250
P{EPg}HP26250
Secondary FlyBase IDs
hide References ( 5 )
Research paper
Staudt et al., 2005, PLoS Gen. 1(4): 499--506
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]