A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EPg}HP26217 Insertion

General Information
Symbol Dmel\P{EPg}HP26217 Species D. melanogaster
Name FlyBase ID FBti0075052
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) MED20 Viability / fertility
Causes allele(s) Stock availability 1 publicly available
LINE ID HP26217
Genomic Location
Chromosomal location 2L ( 28E1 ) Sequence location 2L:8,071,669..8,071,669 [+]
Map ( GBrowse ) detailed view FBti0025738 FBti0046699 FBti0043527 FBti0046631 FBti0003099 FBti0003098 FBti0046085 FBti0109639 FBti0106370 FBti0028659 FBti0050818 FBti0037184 FBti0104521 FBti0003545 FBti0003925_2 FBti0105817 FBti0029200 FBti0028044 FBti0003925_1 FBti0106623 FBti0028130 FBti0007686 FBti0007570 FBti0105556 FBti0039650 FBti0109179 FBti0107677 FBti0075052 FBti0034807 FBti0029454 FBti0107404 FBti0041961 FBti0108864 FBti0026360 FBti0051478
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
2L:8,071,669..8,071,669 [+]
Orientation
Cytological location
(computed by FlyBase)
28E1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
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Flanking sequence
hide Inserted Element
Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
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Insertion may
affect gene
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Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
HP26217
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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Reported As
Symbol Synonym
HP26217
P{EPg}HP26217
P{EPg}MED20HP26217
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Staudt et al., 2005, PLoS Gen. 1(4): 499--506
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
Matthews, 2008.4.15, DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center.
DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center. [FBrf0204789]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]