A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EPg}CG7997HP21752 Insertion

General Information
Symbol Dmel\P{EPg}CG7997HP21752 Species D. melanogaster
Name FlyBase ID FBti0075093
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) CG7997 Viability / fertility
Causes allele(s) CG7997HP21752 Stock availability 1 publicly available
LINE ID HP21752
Genomic Location
Chromosomal location 2R ( 53C1 ) Sequence location 2R:12,231,303..12,231,303 [+]
Map ( GBrowse ) detailed view FBti0025925 FBti0107986 FBti0021338 FBti0072253 FBti0102269 FBti0107581 FBti0111529 FBti0109913 FBti0071160 FBti0040043 FBti0129247 FBti0053021 FBti0024600 FBti0027366 FBti0105385 FBti0112214 FBti0005301 FBti0007599 FBti0107168 FBti0056630 FBti0006533 FBti0016979 FBti0141119 FBti0039341 FBti0103879 FBti0103390 FBti0110229 FBti0112987 FBti0075093 FBti0112927 FBti0006671 FBti0106688 FBti0102658 FBti0103560 FBti0103297 FBti0103296
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
2R:12,231,303..12,231,303 [+]
Orientation
Cytological location
(computed by FlyBase)
53C1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
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Flanking sequence
hide Inserted Element
Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
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Insertion may
affect gene
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Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
HP21752
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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Reported As
Symbol Synonym
HP21752
P{EPg}CG7997HP21752
P{EPg}HP21752
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Staudt et al., 2005, PLoS Gen. 1(4): 499--506
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
Matthews, 2008.4.15, DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center.
DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center. [FBrf0204789]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]