A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EPg}HP20395 Insertion

General Information
Symbol Dmel\P{EPg}HP20395 Species D. melanogaster
Name FlyBase ID FBti0075121
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) Viability / fertility
Causes allele(s) Stock availability 1 publicly available
LINE ID HP20395
Genomic Location
Chromosomal location 2R ( 55C7 ) Sequence location 2R:14,295,348..14,295,348 [-]
Map ( GBrowse ) detailed view FBti0027296 FBti0045543 FBti0066451 FBti0045891 FBti0107521 FBti0069518 FBti0113395 FBti0010959 FBti0112089 FBti0010960 FBti0059587 FBti0056826 FBti0026019 FBti0100084 FBti0056098 FBti0018601 FBti0041420 FBti0125273_2 FBti0125273_1 FBti0104799 FBti0028119 FBti0041442 FBti0034853 FBti0026034 FBti0034218 FBti0112125 FBti0021788 FBti0072793 FBti0054909 FBti0107298 FBti0039770 FBti0050368 FBti0024068 FBti0106600 FBti0025725 FBti0125274_1 FBti0125274_2 FBti0018144 FBti0106905 FBti0024886 FBti0023242 FBti0038892 FBti0041471 FBti0075884 FBti0075121 FBti0042157 FBti0145373 FBti0034253 FBti0038837 FBti0035017 FBti0100077 FBti0017614 FBti0036894 FBti0103856 FBti0028874 FBti0018553 FBti0109560 FBti0077004 FBti0026376 FBti0010973 FBti0102218 FBti0106540 FBti0053833 FBti0053879 FBti0026021 FBti0070528 FBti0011117 FBti0047476 FBti0067858 FBti0125275_2 FBti0125275_1
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:14,295,348..14,295,348 [-]
Orientation
Cytological location
(computed by FlyBase)
55C7 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
HP20395
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
HP20395
P{EPg}HP20395
Secondary FlyBase IDs
hide References ( 5 )
Research paper
Staudt et al., 2005, PLoS Gen. 1(4): 499--506
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]