A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EPg}CG12219HP10673 Insertion

General Information
Symbol Dmel\P{EPg}CG12219HP10673 Species D. melanogaster
Name FlyBase ID FBti0075174
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) CG12219 Viability / fertility
Causes allele(s) CG12219HP10673 Stock availability 1 publicly available
LINE ID HP10673
Genomic Location
Chromosomal location X ( 5E7 ) Sequence location X:6,195,271..6,195,271 [-]
Map ( GBrowse ) detailed view FBti0013127 FBti0042523 FBti0070898 FBti0075992 FBti0075174 FBti0055769 FBti0039064 FBti0071620 FBti0055239
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
X:6,195,271..6,195,271 [-]
Orientation
Cytological location
(computed by FlyBase)
5E7 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
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Flanking sequence
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Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
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Insertion may
affect gene
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Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
HP10673
Origin as a multiple insertion line
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Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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Reported As
Symbol Synonym
HP10673
P{EPg}CG12219HP10673
P{EPg}HP10673
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Staudt et al., 2005, PLoS Gen. 1(4): 499--506
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
Matthews, 2008.4.15, DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center.
DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center. [FBrf0204789]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]